Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 BX088651.1-201ENST00000540551 451 ntBASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 FEM1AP4-201ENST00000443167 1987 ntBASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB40ALP0C0E4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB40ALP0C0E4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB40ALP0C0E4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB40ALP0C0E4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB40ALP0C0E4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB40ALP0C0E4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB40ALP0C0E4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB40ALP0C0E4 AC124283.5-201ENST00000624661 1809 ntBASIC18.77■□□□□ 0.6
RAB40ALP0C0E4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RAB40ALP0C0E4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RAB40ALP0C0E4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RAB40ALP0C0E4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
RAB40ALP0C0E4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.77■□□□□ 0.6
RAB40ALP0C0E4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
RAB40ALP0C0E4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB40ALP0C0E4 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.77■□□□□ 0.6
RAB40ALP0C0E4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.77■□□□□ 0.6
RAB40ALP0C0E4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RAB40ALP0C0E4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB40ALP0C0E4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RAB40ALP0C0E4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RAB40ALP0C0E4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 AC004264.1-201ENST00000608354 794 ntBASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 AL121603.2-201ENST00000557373 2117 ntBASIC18.76■□□□□ 0.59
RAB40ALP0C0E4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 HTR7P1-201ENST00000538670 1336 ntBASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 AC211429.1-201ENST00000415277 523 ntBASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 AF186192.3-201ENST00000583427 947 ntBASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 LINC01023-201ENST00000606054 436 ntBASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RAB40ALP0C0E4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RAB40ALP0C0E4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms