Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
HOXC6P09630 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.58■■□□□ 1.21
HOXC6P09630 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
HOXC6P09630 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
HOXC6P09630 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.58■■□□□ 1.21
HOXC6P09630 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
HOXC6P09630 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.58■■□□□ 1.21
HOXC6P09630 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.58■■□□□ 1.21
HOXC6P09630 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
HOXC6P09630 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.58■■□□□ 1.21
HOXC6P09630 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
HOXC6P09630 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
HOXC6P09630 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
HOXC6P09630 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
HOXC6P09630 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
HOXC6P09630 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
HOXC6P09630 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.58■■□□□ 1.2
HOXC6P09630 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HOXC6P09630 KRT8P17-201ENST00000453110 1448 ntBASIC22.57■■□□□ 1.2
HOXC6P09630 LTBR-211ENST00000543190 785 ntTSL 3 BASIC22.57■■□□□ 1.2
HOXC6P09630 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
HOXC6P09630 DGCR10-201ENST00000609839 495 ntBASIC22.57■■□□□ 1.2
HOXC6P09630 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HOXC6P09630 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
HOXC6P09630 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.57■■□□□ 1.2
HOXC6P09630 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HOXC6P09630 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HOXC6P09630 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
HOXC6P09630 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.56■■□□□ 1.2
HOXC6P09630 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.56■■□□□ 1.2
HOXC6P09630 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
HOXC6P09630 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC22.56■■□□□ 1.2
HOXC6P09630 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
HOXC6P09630 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
HOXC6P09630 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.56■■□□□ 1.2
HOXC6P09630 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
HOXC6P09630 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HOXC6P09630 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HOXC6P09630 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HOXC6P09630 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
HOXC6P09630 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC22.55■■□□□ 1.2
HOXC6P09630 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HOXC6P09630 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC22.55■■□□□ 1.2
HOXC6P09630 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.55■■□□□ 1.2
HOXC6P09630 EGLN1P1-201ENST00000531623 762 ntBASIC22.55■■□□□ 1.2
HOXC6P09630 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC22.55■■□□□ 1.2
HOXC6P09630 AC010203.1-204ENST00000548782 407 ntBASIC22.55■■□□□ 1.2
HOXC6P09630 NTF6B-201ENST00000591913 560 ntBASIC22.55■■□□□ 1.2
HOXC6P09630 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.55■■□□□ 1.2
HOXC6P09630 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.55■■□□□ 1.2
HOXC6P09630 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.55■■□□□ 1.2
HOXC6P09630 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
HOXC6P09630 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HOXC6P09630 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
HOXC6P09630 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.54■■□□□ 1.2
HOXC6P09630 TSPY14P-201ENST00000303979 915 ntBASIC22.54■■□□□ 1.2
HOXC6P09630 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.54■■□□□ 1.2
HOXC6P09630 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.54■■□□□ 1.2
HOXC6P09630 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
HOXC6P09630 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
HOXC6P09630 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.54■■□□□ 1.2
HOXC6P09630 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC22.54■■□□□ 1.2
HOXC6P09630 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC22.54■■□□□ 1.2
HOXC6P09630 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HOXC6P09630 C2orf69P3-201ENST00000565542 1120 ntBASIC22.54■■□□□ 1.2
HOXC6P09630 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
HOXC6P09630 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.54■■□□□ 1.2
HOXC6P09630 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HOXC6P09630 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HOXC6P09630 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HOXC6P09630 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
HOXC6P09630 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.54■■□□□ 1.2
HOXC6P09630 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.54■■□□□ 1.2
HOXC6P09630 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.54■■□□□ 1.2
HOXC6P09630 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HOXC6P09630 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HOXC6P09630 AP006587.1-201ENST00000534129 1502 ntBASIC22.53■■□□□ 1.2
HOXC6P09630 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HOXC6P09630 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HOXC6P09630 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HOXC6P09630 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HOXC6P09630 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HOXC6P09630 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HOXC6P09630 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HOXC6P09630 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.53■■□□□ 1.2
HOXC6P09630 B3GAT3P1-201ENST00000471720 806 ntBASIC22.53■■□□□ 1.2
HOXC6P09630 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HOXC6P09630 AL024507.2-201ENST00000606070 2574 ntBASIC22.53■■□□□ 1.2
HOXC6P09630 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.53■■□□□ 1.2
HOXC6P09630 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.53■■□□□ 1.2
HOXC6P09630 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HOXC6P09630 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
HOXC6P09630 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.53■■□□□ 1.2
HOXC6P09630 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
HOXC6P09630 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.53■■□□□ 1.2
HOXC6P09630 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
HOXC6P09630 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HOXC6P09630 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
HOXC6P09630 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HOXC6P09630 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms