Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.6■□□□□ 0.57
PDGFAP04085 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFAP04085 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFAP04085 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.6■□□□□ 0.57
PDGFAP04085 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFAP04085 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFAP04085 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDGFAP04085 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDGFAP04085 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFAP04085 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.59■□□□□ 0.57
PDGFAP04085 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFAP04085 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFAP04085 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFAP04085 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFAP04085 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFAP04085 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFAP04085 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.59■□□□□ 0.57
PDGFAP04085 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PDGFAP04085 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFAP04085 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFAP04085 RN7SL850P-201ENST00000579959 291 ntBASIC18.59■□□□□ 0.57
PDGFAP04085 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFAP04085 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.59■□□□□ 0.57
PDGFAP04085 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFAP04085 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDGFAP04085 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PDGFAP04085 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PDGFAP04085 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDGFAP04085 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDGFAP04085 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PDGFAP04085 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.58■□□□□ 0.57
PDGFAP04085 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
PDGFAP04085 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDGFAP04085 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFAP04085 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PDGFAP04085 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFAP04085 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFAP04085 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PDGFAP04085 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.58■□□□□ 0.56
PDGFAP04085 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.58■□□□□ 0.56
PDGFAP04085 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.58■□□□□ 0.56
PDGFAP04085 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.58■□□□□ 0.56
PDGFAP04085 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.58■□□□□ 0.56
PDGFAP04085 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFAP04085 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFAP04085 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFAP04085 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.58■□□□□ 0.56
PDGFAP04085 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.58■□□□□ 0.56
PDGFAP04085 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDGFAP04085 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFAP04085 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFAP04085 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.57■□□□□ 0.56
PDGFAP04085 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFAP04085 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.57■□□□□ 0.56
PDGFAP04085 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFAP04085 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PDGFAP04085 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFAP04085 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.57■□□□□ 0.56
PDGFAP04085 TMPOP1-202ENST00000424642 1267 ntBASIC18.57■□□□□ 0.56
PDGFAP04085 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFAP04085 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.57■□□□□ 0.56
PDGFAP04085 CD177P1-201ENST00000606252 935 ntBASIC18.57■□□□□ 0.56
PDGFAP04085 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
PDGFAP04085 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFAP04085 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFAP04085 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFAP04085 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.57■□□□□ 0.56
PDGFAP04085 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDGFAP04085 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PDGFAP04085 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFAP04085 AC124283.5-201ENST00000624661 1809 ntBASIC18.56■□□□□ 0.56
PDGFAP04085 HTR7P1-201ENST00000538670 1336 ntBASIC18.56■□□□□ 0.56
PDGFAP04085 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PDGFAP04085 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFAP04085 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.56■□□□□ 0.56
PDGFAP04085 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFAP04085 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFAP04085 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFAP04085 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.56■□□□□ 0.56
PDGFAP04085 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.56■□□□□ 0.56
PDGFAP04085 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
PDGFAP04085 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.56■□□□□ 0.56
PDGFAP04085 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.56■□□□□ 0.56
PDGFAP04085 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.56■□□□□ 0.56
PDGFAP04085 AF186192.3-201ENST00000583427 947 ntBASIC18.56■□□□□ 0.56
PDGFAP04085 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFAP04085 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
PDGFAP04085 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFAP04085 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFAP04085 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFAP04085 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFAP04085 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFAP04085 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
PDGFAP04085 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDGFAP04085 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFAP04085 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFAP04085 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDGFAP04085 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PDGFAP04085 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.55■□□□□ 0.56
PDGFAP04085 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms