Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND1P03886 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND1P03886 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.72■□□□□ 0.59
MT-ND1P03886 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND1P03886 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND1P03886 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND1P03886 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND1P03886 DUX4L2-201ENST00000561772 1275 ntBASIC18.72■□□□□ 0.59
MT-ND1P03886 TERF1P2-201ENST00000583350 1212 ntBASIC18.72■□□□□ 0.59
MT-ND1P03886 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.72■□□□□ 0.59
MT-ND1P03886 AC104187.1-201ENST00000607510 612 ntBASIC18.72■□□□□ 0.59
MT-ND1P03886 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
MT-ND1P03886 DUX4L6-201ENST00000626483 1275 ntBASIC18.72■□□□□ 0.59
MT-ND1P03886 DUX4L1-201ENST00000627662 1275 ntBASIC18.72■□□□□ 0.59
MT-ND1P03886 DUX4L8-201ENST00000629013 1275 ntBASIC18.72■□□□□ 0.59
MT-ND1P03886 DUX4L3-201ENST00000630187 1275 ntBASIC18.72■□□□□ 0.59
MT-ND1P03886 DUX4L7-201ENST00000630678 1275 ntBASIC18.72■□□□□ 0.59
MT-ND1P03886 DUX4L5-201ENST00000630834 1275 ntBASIC18.72■□□□□ 0.59
MT-ND1P03886 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND1P03886 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND1P03886 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND1P03886 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MT-ND1P03886 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
MT-ND1P03886 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
MT-ND1P03886 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.71■□□□□ 0.59
MT-ND1P03886 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
MT-ND1P03886 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.71■□□□□ 0.59
MT-ND1P03886 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND1P03886 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND1P03886 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND1P03886 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.71■□□□□ 0.59
MT-ND1P03886 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.71■□□□□ 0.59
MT-ND1P03886 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND1P03886 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND1P03886 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND1P03886 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND1P03886 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.71■□□□□ 0.59
MT-ND1P03886 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.71■□□□□ 0.59
MT-ND1P03886 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND1P03886 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.71■□□□□ 0.59
MT-ND1P03886 YBX1P1-201ENST00000445822 960 ntBASIC18.71■□□□□ 0.59
MT-ND1P03886 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.71■□□□□ 0.59
MT-ND1P03886 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND1P03886 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND1P03886 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.71■□□□□ 0.59
MT-ND1P03886 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND1P03886 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MT-ND1P03886 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
MT-ND1P03886 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND1P03886 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.7■□□□□ 0.58
MT-ND1P03886 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND1P03886 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND1P03886 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND1P03886 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.7■□□□□ 0.58
MT-ND1P03886 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.7■□□□□ 0.58
MT-ND1P03886 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND1P03886 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.7■□□□□ 0.58
MT-ND1P03886 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND1P03886 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND1P03886 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.7■□□□□ 0.58
MT-ND1P03886 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND1P03886 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
MT-ND1P03886 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.7■□□□□ 0.58
MT-ND1P03886 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND1P03886 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.7■□□□□ 0.58
MT-ND1P03886 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.7■□□□□ 0.58
MT-ND1P03886 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.7■□□□□ 0.58
MT-ND1P03886 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.7■□□□□ 0.58
MT-ND1P03886 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND1P03886 SLC7A5P2-201ENST00000553010 536 ntBASIC18.7■□□□□ 0.58
MT-ND1P03886 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.7■□□□□ 0.58
MT-ND1P03886 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
MT-ND1P03886 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.7■□□□□ 0.58
MT-ND1P03886 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.7■□□□□ 0.58
MT-ND1P03886 Z82202.1-201ENST00000623446 1880 ntBASIC18.7■□□□□ 0.58
MT-ND1P03886 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND1P03886 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND1P03886 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND1P03886 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND1P03886 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.7■□□□□ 0.58
MT-ND1P03886 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND1P03886 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.7■□□□□ 0.58
MT-ND1P03886 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.7■□□□□ 0.58
MT-ND1P03886 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MT-ND1P03886 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.69■□□□□ 0.58
MT-ND1P03886 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MT-ND1P03886 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
MT-ND1P03886 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
MT-ND1P03886 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.69■□□□□ 0.58
MT-ND1P03886 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND1P03886 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.69■□□□□ 0.58
MT-ND1P03886 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND1P03886 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.69■□□□□ 0.58
MT-ND1P03886 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.69■□□□□ 0.58
MT-ND1P03886 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MT-ND1P03886 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
MT-ND1P03886 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
MT-ND1P03886 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND1P03886 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MT-ND1P03886 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms