Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT1O95170 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT1O95170 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT1O95170 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT1O95170 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT1O95170 BX119927.1-201ENST00000636596 1552 ntBASIC17.71■□□□□ 0.43
CDRT1O95170 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CDRT1O95170 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CDRT1O95170 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CDRT1O95170 HCG11-201ENST00000411553 5696 ntBASIC17.71■□□□□ 0.43
CDRT1O95170 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.71■□□□□ 0.43
CDRT1O95170 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.71■□□□□ 0.43
CDRT1O95170 MIR939-201ENST00000401314 82 ntBASIC17.71■□□□□ 0.43
CDRT1O95170 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.71■□□□□ 0.43
CDRT1O95170 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.71■□□□□ 0.43
CDRT1O95170 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.71■□□□□ 0.43
CDRT1O95170 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT1O95170 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT1O95170 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT1O95170 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT1O95170 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CDRT1O95170 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDRT1O95170 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CDRT1O95170 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
CDRT1O95170 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDRT1O95170 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDRT1O95170 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDRT1O95170 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.7■□□□□ 0.42
CDRT1O95170 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDRT1O95170 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDRT1O95170 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDRT1O95170 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.7■□□□□ 0.42
CDRT1O95170 AC110285.6-201ENST00000617652 491 ntBASIC17.7■□□□□ 0.42
CDRT1O95170 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.7■□□□□ 0.42
CDRT1O95170 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDRT1O95170 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDRT1O95170 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDRT1O95170 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDRT1O95170 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.7■□□□□ 0.42
CDRT1O95170 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDRT1O95170 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDRT1O95170 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDRT1O95170 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.7■□□□□ 0.42
CDRT1O95170 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDRT1O95170 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.69■□□□□ 0.42
CDRT1O95170 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDRT1O95170 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.69■□□□□ 0.42
CDRT1O95170 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDRT1O95170 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.69■□□□□ 0.42
CDRT1O95170 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDRT1O95170 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.69■□□□□ 0.42
CDRT1O95170 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDRT1O95170 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDRT1O95170 AC090340.1-201ENST00000620778 4980 ntBASIC17.69■□□□□ 0.42
CDRT1O95170 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDRT1O95170 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDRT1O95170 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDRT1O95170 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDRT1O95170 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDRT1O95170 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDRT1O95170 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.69■□□□□ 0.42
CDRT1O95170 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDRT1O95170 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.69■□□□□ 0.42
CDRT1O95170 EEF1DP3-203ENST00000566025 782 ntBASIC17.69■□□□□ 0.42
CDRT1O95170 AC053503.5-201ENST00000601508 636 ntBASIC17.69■□□□□ 0.42
CDRT1O95170 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDRT1O95170 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDRT1O95170 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDRT1O95170 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.69■□□□□ 0.42
CDRT1O95170 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.69■□□□□ 0.42
CDRT1O95170 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDRT1O95170 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDRT1O95170 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDRT1O95170 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDRT1O95170 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDRT1O95170 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.68■□□□□ 0.42
CDRT1O95170 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDRT1O95170 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDRT1O95170 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.68■□□□□ 0.42
CDRT1O95170 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDRT1O95170 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDRT1O95170 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDRT1O95170 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDRT1O95170 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.68■□□□□ 0.42
CDRT1O95170 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.68■□□□□ 0.42
CDRT1O95170 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.68■□□□□ 0.42
CDRT1O95170 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.68■□□□□ 0.42
CDRT1O95170 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDRT1O95170 AC091305.1-201ENST00000479476 895 ntBASIC17.68■□□□□ 0.42
CDRT1O95170 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.68■□□□□ 0.42
CDRT1O95170 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.68■□□□□ 0.42
CDRT1O95170 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.68■□□□□ 0.42
CDRT1O95170 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDRT1O95170 AL136967.2-201ENST00000623968 743 ntBASIC17.68■□□□□ 0.42
CDRT1O95170 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CDRT1O95170 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CDRT1O95170 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDRT1O95170 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDRT1O95170 AL138781.2-201ENST00000617896 1843 ntBASIC17.68■□□□□ 0.42
CDRT1O95170 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms