Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SSNA1O43805 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSNA1O43805 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSNA1O43805 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SSNA1O43805 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
SSNA1O43805 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.95■□□□□ 0.3
SSNA1O43805 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSNA1O43805 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.95■□□□□ 0.3
SSNA1O43805 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSNA1O43805 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.95■□□□□ 0.3
SSNA1O43805 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSNA1O43805 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSNA1O43805 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SSNA1O43805 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.95■□□□□ 0.3
SSNA1O43805 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSNA1O43805 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSNA1O43805 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSNA1O43805 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSNA1O43805 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
SSNA1O43805 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SSNA1O43805 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSNA1O43805 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSNA1O43805 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSNA1O43805 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.94■□□□□ 0.3
SSNA1O43805 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSNA1O43805 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSNA1O43805 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSNA1O43805 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSNA1O43805 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSNA1O43805 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SSNA1O43805 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
SSNA1O43805 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.94■□□□□ 0.3
SSNA1O43805 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.94■□□□□ 0.3
SSNA1O43805 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.94■□□□□ 0.3
SSNA1O43805 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.94■□□□□ 0.3
SSNA1O43805 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.94■□□□□ 0.3
SSNA1O43805 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SSNA1O43805 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SSNA1O43805 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.94■□□□□ 0.3
SSNA1O43805 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSNA1O43805 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSNA1O43805 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.94■□□□□ 0.3
SSNA1O43805 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
SSNA1O43805 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSNA1O43805 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.94■□□□□ 0.3
SSNA1O43805 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSNA1O43805 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSNA1O43805 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSNA1O43805 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSNA1O43805 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.93■□□□□ 0.3
SSNA1O43805 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSNA1O43805 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSNA1O43805 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSNA1O43805 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSNA1O43805 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SSNA1O43805 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSNA1O43805 AC104581.1-202ENST00000635932 2618 ntBASIC16.93■□□□□ 0.3
SSNA1O43805 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSNA1O43805 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSNA1O43805 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSNA1O43805 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSNA1O43805 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SSNA1O43805 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SSNA1O43805 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSNA1O43805 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSNA1O43805 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.93■□□□□ 0.3
SSNA1O43805 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSNA1O43805 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSNA1O43805 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSNA1O43805 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSNA1O43805 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.93■□□□□ 0.3
SSNA1O43805 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
SSNA1O43805 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SSNA1O43805 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.92■□□□□ 0.3
SSNA1O43805 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.92■□□□□ 0.3
SSNA1O43805 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.92■□□□□ 0.3
SSNA1O43805 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.92■□□□□ 0.3
SSNA1O43805 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.92■□□□□ 0.3
SSNA1O43805 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.92■□□□□ 0.3
SSNA1O43805 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SSNA1O43805 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.92■□□□□ 0.3
SSNA1O43805 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SSNA1O43805 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SSNA1O43805 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SSNA1O43805 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.92■□□□□ 0.3
SSNA1O43805 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSNA1O43805 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SSNA1O43805 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms