Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TO15178 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.34■□□□□ 0.53
TO15178 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.33■□□□□ 0.53
TO15178 TCF3P1-201ENST00000423021 1937 ntBASIC18.33■□□□□ 0.53
TO15178 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TO15178 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
TO15178 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.33■□□□□ 0.53
TO15178 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.33■□□□□ 0.53
TO15178 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TO15178 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TO15178 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TO15178 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.33■□□□□ 0.52
TO15178 ESRRAP1-201ENST00000400596 1257 ntBASIC18.33■□□□□ 0.52
TO15178 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.33■□□□□ 0.52
TO15178 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TO15178 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TO15178 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.33■□□□□ 0.52
TO15178 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.33■□□□□ 0.52
TO15178 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.33■□□□□ 0.52
TO15178 PHGDH-210ENST00000641115 1638 ntBASIC18.33■□□□□ 0.52
TO15178 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
TO15178 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TO15178 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TO15178 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
TO15178 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
TO15178 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.32■□□□□ 0.52
TO15178 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TO15178 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.32■□□□□ 0.52
TO15178 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
TO15178 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TO15178 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TO15178 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.32■□□□□ 0.52
TO15178 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.32■□□□□ 0.52
TO15178 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
TO15178 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TO15178 MIR4651-201ENST00000582622 73 ntBASIC18.32■□□□□ 0.52
TO15178 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TO15178 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.32■□□□□ 0.52
TO15178 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TO15178 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
TO15178 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.32■□□□□ 0.52
TO15178 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TO15178 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.32■□□□□ 0.52
TO15178 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TO15178 AL691432.2-201ENST00000607222 2038 ntBASIC18.32■□□□□ 0.52
TO15178 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TO15178 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.32■□□□□ 0.52
TO15178 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.31■□□□□ 0.52
TO15178 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TO15178 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TO15178 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TO15178 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TO15178 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TO15178 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TO15178 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.31■□□□□ 0.52
TO15178 AC116351.2-201ENST00000606540 1585 ntBASIC18.31■□□□□ 0.52
TO15178 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TO15178 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TO15178 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TO15178 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TO15178 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.31■□□□□ 0.52
TO15178 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.31■□□□□ 0.52
TO15178 POU5F1P3-201ENST00000428824 1078 ntBASIC18.31■□□□□ 0.52
TO15178 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.31■□□□□ 0.52
TO15178 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TO15178 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.31■□□□□ 0.52
TO15178 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TO15178 AL121829.2-201ENST00000620908 328 ntBASIC18.31■□□□□ 0.52
TO15178 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.31■□□□□ 0.52
TO15178 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TO15178 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TO15178 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TO15178 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TO15178 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TO15178 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TO15178 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TO15178 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TO15178 KRT17P3-201ENST00000420566 1262 ntBASIC18.3■□□□□ 0.52
TO15178 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.3■□□□□ 0.52
TO15178 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TO15178 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.3■□□□□ 0.52
TO15178 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.3■□□□□ 0.52
TO15178 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.3■□□□□ 0.52
TO15178 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TO15178 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TO15178 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TO15178 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TO15178 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TO15178 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TO15178 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TO15178 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TO15178 AP001271.2-201ENST00000624018 1556 ntBASIC18.3■□□□□ 0.52
TO15178 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.29■□□□□ 0.52
TO15178 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.29■□□□□ 0.52
TO15178 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.29■□□□□ 0.52
TO15178 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TO15178 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TO15178 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TO15178 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TO15178 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms