Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPK1AO00322 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPK1AO00322 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.88■□□□□ 0.61
UPK1AO00322 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPK1AO00322 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPK1AO00322 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1AO00322 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1AO00322 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1AO00322 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.87■□□□□ 0.61
UPK1AO00322 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.87■□□□□ 0.61
UPK1AO00322 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1AO00322 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1AO00322 MIR663A-201ENST00000385250 93 ntBASIC18.87■□□□□ 0.61
UPK1AO00322 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1AO00322 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.87■□□□□ 0.61
UPK1AO00322 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.87■□□□□ 0.61
UPK1AO00322 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1AO00322 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1AO00322 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1AO00322 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1AO00322 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.87■□□□□ 0.61
UPK1AO00322 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.87■□□□□ 0.61
UPK1AO00322 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.87■□□□□ 0.61
UPK1AO00322 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
UPK1AO00322 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.87■□□□□ 0.61
UPK1AO00322 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.87■□□□□ 0.61
UPK1AO00322 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.87■□□□□ 0.61
UPK1AO00322 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.87■□□□□ 0.61
UPK1AO00322 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.86■□□□□ 0.61
UPK1AO00322 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UPK1AO00322 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1AO00322 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.86■□□□□ 0.61
UPK1AO00322 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1AO00322 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1AO00322 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
UPK1AO00322 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1AO00322 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1AO00322 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1AO00322 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.86■□□□□ 0.61
UPK1AO00322 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1AO00322 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.86■□□□□ 0.61
UPK1AO00322 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1AO00322 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UPK1AO00322 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1AO00322 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1AO00322 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1AO00322 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1AO00322 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.86■□□□□ 0.61
UPK1AO00322 AC092666.2-201ENST00000613287 246 ntBASIC18.86■□□□□ 0.61
UPK1AO00322 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1AO00322 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.86■□□□□ 0.61
UPK1AO00322 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.86■□□□□ 0.61
UPK1AO00322 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UPK1AO00322 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1AO00322 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1AO00322 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
UPK1AO00322 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1AO00322 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1AO00322 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1AO00322 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
UPK1AO00322 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1AO00322 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1AO00322 AL691432.2-201ENST00000607222 2038 ntBASIC18.85■□□□□ 0.61
UPK1AO00322 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1AO00322 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
UPK1AO00322 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1AO00322 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1AO00322 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.85■□□□□ 0.61
UPK1AO00322 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1AO00322 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1AO00322 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
UPK1AO00322 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1AO00322 AC093484.2-201ENST00000580996 2166 ntBASIC18.85■□□□□ 0.61
UPK1AO00322 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1AO00322 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UPK1AO00322 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPK1AO00322 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPK1AO00322 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPK1AO00322 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPK1AO00322 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPK1AO00322 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPK1AO00322 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPK1AO00322 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPK1AO00322 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.84■□□□□ 0.61
UPK1AO00322 AF201337.1-201ENST00000520239 748 ntBASIC18.84■□□□□ 0.61
UPK1AO00322 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.84■□□□□ 0.61
UPK1AO00322 AC105036.2-201ENST00000569468 176 ntBASIC18.84■□□□□ 0.61
UPK1AO00322 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.84■□□□□ 0.61
UPK1AO00322 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPK1AO00322 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.84■□□□□ 0.61
UPK1AO00322 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPK1AO00322 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UPK1AO00322 KRT17P1-201ENST00000399211 1546 ntBASIC18.84■□□□□ 0.61
UPK1AO00322 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.84■□□□□ 0.61
UPK1AO00322 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UPK1AO00322 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPK1AO00322 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPK1AO00322 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
UPK1AO00322 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UPK1AO00322 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms