Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF223E7ERA6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RNF223E7ERA6 KRT8P20-201ENST00000423953 1409 ntBASIC16.53■□□□□ 0.24
RNF223E7ERA6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF223E7ERA6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF223E7ERA6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF223E7ERA6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF223E7ERA6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF223E7ERA6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF223E7ERA6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF223E7ERA6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF223E7ERA6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF223E7ERA6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF223E7ERA6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF223E7ERA6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF223E7ERA6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF223E7ERA6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF223E7ERA6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF223E7ERA6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF223E7ERA6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF223E7ERA6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF223E7ERA6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF223E7ERA6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF223E7ERA6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF223E7ERA6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RNF223E7ERA6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF223E7ERA6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF223E7ERA6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF223E7ERA6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
RNF223E7ERA6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF223E7ERA6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF223E7ERA6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF223E7ERA6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
RNF223E7ERA6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF223E7ERA6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF223E7ERA6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF223E7ERA6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
RNF223E7ERA6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
RNF223E7ERA6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.52■□□□□ 0.24
RNF223E7ERA6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.52■□□□□ 0.24
RNF223E7ERA6 C2orf69P3-201ENST00000565542 1120 ntBASIC16.52■□□□□ 0.24
RNF223E7ERA6 WWOX-216ENST00000569818 525 ntBASIC16.52■□□□□ 0.24
RNF223E7ERA6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF223E7ERA6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF223E7ERA6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF223E7ERA6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RNF223E7ERA6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
RNF223E7ERA6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.52■□□□□ 0.23
RNF223E7ERA6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RNF223E7ERA6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF223E7ERA6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF223E7ERA6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF223E7ERA6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF223E7ERA6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
RNF223E7ERA6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF223E7ERA6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF223E7ERA6 FSCN1P1-201ENST00000568912 1481 ntBASIC16.51■□□□□ 0.23
RNF223E7ERA6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF223E7ERA6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.51■□□□□ 0.23
RNF223E7ERA6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF223E7ERA6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.51■□□□□ 0.23
RNF223E7ERA6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF223E7ERA6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.51■□□□□ 0.23
RNF223E7ERA6 ECEL1P2-202ENST00000465689 757 ntBASIC16.51■□□□□ 0.23
RNF223E7ERA6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF223E7ERA6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF223E7ERA6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF223E7ERA6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RNF223E7ERA6 PAX6-247ENST00000638965 979 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF223E7ERA6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF223E7ERA6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RNF223E7ERA6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RNF223E7ERA6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF223E7ERA6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF223E7ERA6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF223E7ERA6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF223E7ERA6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RNF223E7ERA6 PTBP1P-201ENST00000554374 1601 ntBASIC16.5■□□□□ 0.23
RNF223E7ERA6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF223E7ERA6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF223E7ERA6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF223E7ERA6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF223E7ERA6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF223E7ERA6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RNF223E7ERA6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF223E7ERA6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF223E7ERA6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF223E7ERA6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF223E7ERA6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
RNF223E7ERA6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF223E7ERA6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF223E7ERA6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RNF223E7ERA6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RNF223E7ERA6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF223E7ERA6 AC121338.2-201ENST00000622535 1744 ntBASIC16.5■□□□□ 0.23
RNF223E7ERA6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF223E7ERA6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF223E7ERA6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF223E7ERA6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF223E7ERA6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms