Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMEM88BA6NKF7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC23.32■■□□□ 1.32
TMEM88BA6NKF7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMEM88BA6NKF7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.32■■□□□ 1.32
TMEM88BA6NKF7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TMEM88BA6NKF7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC23.32■■□□□ 1.32
TMEM88BA6NKF7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMEM88BA6NKF7 AL023803.3-201ENST00000615559 522 ntBASIC23.32■■□□□ 1.32
TMEM88BA6NKF7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMEM88BA6NKF7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.32■■□□□ 1.32
TMEM88BA6NKF7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMEM88BA6NKF7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMEM88BA6NKF7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM88BA6NKF7 AL022342.1-201ENST00000400363 863 ntBASIC23.31■■□□□ 1.32
TMEM88BA6NKF7 AC004951.3-201ENST00000418645 1148 ntBASIC23.31■■□□□ 1.32
TMEM88BA6NKF7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC23.31■■□□□ 1.32
TMEM88BA6NKF7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC23.31■■□□□ 1.32
TMEM88BA6NKF7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC23.31■■□□□ 1.32
TMEM88BA6NKF7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC23.31■■□□□ 1.32
TMEM88BA6NKF7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM88BA6NKF7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM88BA6NKF7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.31■■□□□ 1.32
TMEM88BA6NKF7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
TMEM88BA6NKF7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.31■■□□□ 1.32
TMEM88BA6NKF7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM88BA6NKF7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM88BA6NKF7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TMEM88BA6NKF7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
TMEM88BA6NKF7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC23.3■■□□□ 1.32
TMEM88BA6NKF7 AC112907.2-201ENST00000448639 330 ntBASIC23.3■■□□□ 1.32
TMEM88BA6NKF7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC23.3■■□□□ 1.32
TMEM88BA6NKF7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC23.3■■□□□ 1.32
TMEM88BA6NKF7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TMEM88BA6NKF7 AC092119.3-201ENST00000612618 583 ntBASIC23.3■■□□□ 1.32
TMEM88BA6NKF7 NPAP1P7-201ENST00000613027 823 ntBASIC23.3■■□□□ 1.32
TMEM88BA6NKF7 AC083849.1-201ENST00000615227 514 ntBASIC23.3■■□□□ 1.32
TMEM88BA6NKF7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.3■■□□□ 1.32
TMEM88BA6NKF7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TMEM88BA6NKF7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TMEM88BA6NKF7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TMEM88BA6NKF7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.3■■□□□ 1.32
TMEM88BA6NKF7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
TMEM88BA6NKF7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
TMEM88BA6NKF7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM88BA6NKF7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM88BA6NKF7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM88BA6NKF7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM88BA6NKF7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM88BA6NKF7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
TMEM88BA6NKF7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC23.29■■□□□ 1.32
TMEM88BA6NKF7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.29■■□□□ 1.32
TMEM88BA6NKF7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.29■■□□□ 1.32
TMEM88BA6NKF7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM88BA6NKF7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC23.29■■□□□ 1.32
TMEM88BA6NKF7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23.29■■□□□ 1.32
TMEM88BA6NKF7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM88BA6NKF7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM88BA6NKF7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM88BA6NKF7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMEM88BA6NKF7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
TMEM88BA6NKF7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC23.28■■□□□ 1.32
TMEM88BA6NKF7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TMEM88BA6NKF7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMEM88BA6NKF7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC23.28■■□□□ 1.32
TMEM88BA6NKF7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC23.28■■□□□ 1.32
TMEM88BA6NKF7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC23.28■■□□□ 1.32
TMEM88BA6NKF7 AL353719.1-201ENST00000566847 864 ntBASIC23.28■■□□□ 1.32
TMEM88BA6NKF7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TMEM88BA6NKF7 AC080038.3-201ENST00000623346 1952 ntBASIC23.28■■□□□ 1.32
TMEM88BA6NKF7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
TMEM88BA6NKF7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.28■■□□□ 1.32
TMEM88BA6NKF7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
TMEM88BA6NKF7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.27■■□□□ 1.32
TMEM88BA6NKF7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMEM88BA6NKF7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMEM88BA6NKF7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TMEM88BA6NKF7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC23.27■■□□□ 1.32
TMEM88BA6NKF7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC23.27■■□□□ 1.32
TMEM88BA6NKF7 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
TMEM88BA6NKF7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TMEM88BA6NKF7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TMEM88BA6NKF7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.27■■□□□ 1.32
TMEM88BA6NKF7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TMEM88BA6NKF7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
TMEM88BA6NKF7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM88BA6NKF7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
TMEM88BA6NKF7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM88BA6NKF7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM88BA6NKF7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM88BA6NKF7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM88BA6NKF7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TMEM88BA6NKF7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
TMEM88BA6NKF7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC23.26■■□□□ 1.31
TMEM88BA6NKF7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC23.26■■□□□ 1.31
TMEM88BA6NKF7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC23.26■■□□□ 1.31
TMEM88BA6NKF7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC23.26■■□□□ 1.31
TMEM88BA6NKF7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC23.26■■□□□ 1.31
TMEM88BA6NKF7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC23.26■■□□□ 1.31
TMEM88BA6NKF7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC23.26■■□□□ 1.31
TMEM88BA6NKF7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms