Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.13■□□□□ 0.65
CNOT1A5YKK6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 AL023803.3-201ENST00000615559 522 ntBASIC19.12■□□□□ 0.65
CNOT1A5YKK6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CNOT1A5YKK6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT1A5YKK6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.11■□□□□ 0.65
CNOT1A5YKK6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT1A5YKK6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT1A5YKK6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT1A5YKK6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT1A5YKK6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.11■□□□□ 0.65
CNOT1A5YKK6 AP000692.2-201ENST00000608391 879 ntBASIC19.11■□□□□ 0.65
CNOT1A5YKK6 HYMAI.1-201ENST00000620949 238 ntBASIC19.11■□□□□ 0.65
CNOT1A5YKK6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.11■□□□□ 0.65
CNOT1A5YKK6 AC116562.4-202ENST00000641738 218 ntBASIC19.11■□□□□ 0.65
CNOT1A5YKK6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT1A5YKK6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT1A5YKK6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT1A5YKK6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT1A5YKK6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT1A5YKK6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT1A5YKK6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CNOT1A5YKK6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT1A5YKK6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT1A5YKK6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CNOT1A5YKK6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT1A5YKK6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT1A5YKK6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.1■□□□□ 0.65
CNOT1A5YKK6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT1A5YKK6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT1A5YKK6 HOMER2P1-201ENST00000455653 964 ntBASIC19.1■□□□□ 0.65
CNOT1A5YKK6 CKBP1-201ENST00000565489 1086 ntBASIC19.1■□□□□ 0.65
CNOT1A5YKK6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.1■□□□□ 0.65
CNOT1A5YKK6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT1A5YKK6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.1■□□□□ 0.65
CNOT1A5YKK6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT1A5YKK6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.1■□□□□ 0.65
CNOT1A5YKK6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.1■□□□□ 0.65
CNOT1A5YKK6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT1A5YKK6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.1■□□□□ 0.65
CNOT1A5YKK6 KRT17P6-201ENST00000453795 1220 ntBASIC19.1■□□□□ 0.65
CNOT1A5YKK6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT1A5YKK6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT1A5YKK6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT1A5YKK6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT1A5YKK6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT1A5YKK6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CNOT1A5YKK6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.09■□□□□ 0.65
CNOT1A5YKK6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.09■□□□□ 0.65
CNOT1A5YKK6 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT1A5YKK6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT1A5YKK6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.09■□□□□ 0.65
CNOT1A5YKK6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.09■□□□□ 0.65
CNOT1A5YKK6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT1A5YKK6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.09■□□□□ 0.65
CNOT1A5YKK6 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.08■□□□□ 0.65
CNOT1A5YKK6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.08■□□□□ 0.65
CNOT1A5YKK6 AL136038.3-201ENST00000561909 1096 ntBASIC19.08■□□□□ 0.65
CNOT1A5YKK6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.08■□□□□ 0.65
CNOT1A5YKK6 AC010653.2-201ENST00000623505 997 ntBASIC19.08■□□□□ 0.65
CNOT1A5YKK6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.08■□□□□ 0.65
CNOT1A5YKK6 KRT8P36-201ENST00000489121 1440 ntBASIC19.08■□□□□ 0.65
CNOT1A5YKK6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT1A5YKK6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CNOT1A5YKK6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.08■□□□□ 0.65
CNOT1A5YKK6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.08■□□□□ 0.65
CNOT1A5YKK6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms