Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
SBNO1A3KN83 AC133561.1-201ENST00000568600 2415 ntBASIC27.13■■□□□ 1.93
SBNO1A3KN83 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC27.12■■□□□ 1.93
SBNO1A3KN83 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SBNO1A3KN83 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
SBNO1A3KN83 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
SBNO1A3KN83 AC117947.1-201ENST00000427448 529 ntBASIC27.12■■□□□ 1.93
SBNO1A3KN83 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC27.12■■□□□ 1.93
SBNO1A3KN83 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC27.12■■□□□ 1.93
SBNO1A3KN83 LINC01238-205ENST00000567549 1107 ntBASIC27.12■■□□□ 1.93
SBNO1A3KN83 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
SBNO1A3KN83 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC27.12■■□□□ 1.93
SBNO1A3KN83 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC27.12■■□□□ 1.93
SBNO1A3KN83 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SBNO1A3KN83 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC27.12■■□□□ 1.93
SBNO1A3KN83 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
SBNO1A3KN83 BID-212ENST00000614949 1988 ntTSL 5 BASIC27.12■■□□□ 1.93
SBNO1A3KN83 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SBNO1A3KN83 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
SBNO1A3KN83 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
SBNO1A3KN83 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SBNO1A3KN83 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC27.11■■□□□ 1.93
SBNO1A3KN83 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SBNO1A3KN83 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
SBNO1A3KN83 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SBNO1A3KN83 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC27.11■■□□□ 1.93
SBNO1A3KN83 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC27.11■■□□□ 1.93
SBNO1A3KN83 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC27.11■■□□□ 1.93
SBNO1A3KN83 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SBNO1A3KN83 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
SBNO1A3KN83 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SBNO1A3KN83 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
SBNO1A3KN83 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC27.11■■□□□ 1.93
SBNO1A3KN83 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC27.11■■□□□ 1.93
SBNO1A3KN83 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC27.11■■□□□ 1.93
SBNO1A3KN83 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SBNO1A3KN83 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
SBNO1A3KN83 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SBNO1A3KN83 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
SBNO1A3KN83 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC27.1■■□□□ 1.93
SBNO1A3KN83 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SBNO1A3KN83 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SBNO1A3KN83 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SBNO1A3KN83 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC27.1■■□□□ 1.93
SBNO1A3KN83 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SBNO1A3KN83 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC27.1■■□□□ 1.93
SBNO1A3KN83 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC27.1■■□□□ 1.93
SBNO1A3KN83 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SBNO1A3KN83 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SBNO1A3KN83 AC091390.4-202ENST00000476426 537 ntBASIC27.09■■□□□ 1.93
SBNO1A3KN83 AC097488.1-201ENST00000507834 756 ntBASIC27.09■■□□□ 1.93
SBNO1A3KN83 METTL23-204ENST00000586752 904 ntTSL 2 BASIC27.09■■□□□ 1.93
SBNO1A3KN83 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC27.09■■□□□ 1.93
SBNO1A3KN83 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SBNO1A3KN83 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC27.09■■□□□ 1.93
SBNO1A3KN83 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SBNO1A3KN83 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SBNO1A3KN83 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
SBNO1A3KN83 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SBNO1A3KN83 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SBNO1A3KN83 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC27.09■■□□□ 1.93
SBNO1A3KN83 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SBNO1A3KN83 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SBNO1A3KN83 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC27.09■■□□□ 1.93
SBNO1A3KN83 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC27.09■■□□□ 1.93
SBNO1A3KN83 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC27.09■■□□□ 1.93
SBNO1A3KN83 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SBNO1A3KN83 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
SBNO1A3KN83 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SBNO1A3KN83 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC27.08■■□□□ 1.93
SBNO1A3KN83 AL031133.1-201ENST00000406807 723 ntBASIC27.08■■□□□ 1.93
SBNO1A3KN83 HMGA1P5-201ENST00000412453 271 ntBASIC27.08■■□□□ 1.93
SBNO1A3KN83 SAPCD2P2-201ENST00000431719 1174 ntBASIC27.08■■□□□ 1.93
SBNO1A3KN83 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC27.08■■□□□ 1.93
SBNO1A3KN83 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC27.08■■□□□ 1.93
SBNO1A3KN83 AL138966.2-201ENST00000621997 464 ntBASIC27.08■■□□□ 1.93
SBNO1A3KN83 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SBNO1A3KN83 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC27.07■■□□□ 1.92
SBNO1A3KN83 AC121338.2-201ENST00000622535 1744 ntBASIC27.07■■□□□ 1.92
SBNO1A3KN83 AP006587.1-201ENST00000534129 1502 ntBASIC27.07■■□□□ 1.92
SBNO1A3KN83 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC27.07■■□□□ 1.92
SBNO1A3KN83 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SBNO1A3KN83 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SBNO1A3KN83 CRYGFP-201ENST00000418459 633 ntBASIC27.07■■□□□ 1.92
SBNO1A3KN83 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
SBNO1A3KN83 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC27.07■■□□□ 1.92
SBNO1A3KN83 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SBNO1A3KN83 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SBNO1A3KN83 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SBNO1A3KN83 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC27.06■■□□□ 1.92
SBNO1A3KN83 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SBNO1A3KN83 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SBNO1A3KN83 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
SBNO1A3KN83 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC27.06■■□□□ 1.92
SBNO1A3KN83 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SBNO1A3KN83 COPE-203ENST00000351079 907 ntTSL 2 BASIC27.06■■□□□ 1.92
SBNO1A3KN83 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC27.06■■□□□ 1.92
SBNO1A3KN83 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SBNO1A3KN83 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
SBNO1A3KN83 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms