Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC196A0A1B0GTZ2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCDC196A0A1B0GTZ2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 PHGDH-210ENST00000641115 1638 ntBASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC23.15■■□□□ 1.3
CCDC196A0A1B0GTZ2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.14■■□□□ 1.3
CCDC196A0A1B0GTZ2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC196A0A1B0GTZ2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC196A0A1B0GTZ2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.14■■□□□ 1.3
CCDC196A0A1B0GTZ2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC196A0A1B0GTZ2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CCDC196A0A1B0GTZ2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC196A0A1B0GTZ2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC196A0A1B0GTZ2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC196A0A1B0GTZ2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC196A0A1B0GTZ2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.14■■□□□ 1.29
CCDC196A0A1B0GTZ2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC196A0A1B0GTZ2 TMEM179-206ENST00000616017 1645 ntBASIC23.14■■□□□ 1.29
CCDC196A0A1B0GTZ2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC196A0A1B0GTZ2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.14■■□□□ 1.29
CCDC196A0A1B0GTZ2 AP001271.2-201ENST00000624018 1556 ntBASIC23.14■■□□□ 1.29
CCDC196A0A1B0GTZ2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC196A0A1B0GTZ2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
CCDC196A0A1B0GTZ2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC196A0A1B0GTZ2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC196A0A1B0GTZ2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC196A0A1B0GTZ2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC196A0A1B0GTZ2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC196A0A1B0GTZ2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC196A0A1B0GTZ2 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.12■■□□□ 1.29
CCDC196A0A1B0GTZ2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.12■■□□□ 1.29
CCDC196A0A1B0GTZ2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.12■■□□□ 1.29
CCDC196A0A1B0GTZ2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.12■■□□□ 1.29
CCDC196A0A1B0GTZ2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.12■■□□□ 1.29
CCDC196A0A1B0GTZ2 UNC93B5-201ENST00000530315 699 ntBASIC23.12■■□□□ 1.29
CCDC196A0A1B0GTZ2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
CCDC196A0A1B0GTZ2 KRT18P6-201ENST00000555540 1265 ntBASIC23.12■■□□□ 1.29
CCDC196A0A1B0GTZ2 RNF165-205ENST00000588679 2904 ntBASIC23.12■■□□□ 1.29
CCDC196A0A1B0GTZ2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.12■■□□□ 1.29
CCDC196A0A1B0GTZ2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.12■■□□□ 1.29
CCDC196A0A1B0GTZ2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC196A0A1B0GTZ2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.12■■□□□ 1.29
CCDC196A0A1B0GTZ2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 AC009237.14-201ENST00000609975 1594 ntBASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 UNC93B4-201ENST00000505679 747 ntBASIC23.11■■□□□ 1.29
CCDC196A0A1B0GTZ2 RNA5SP413-201ENST00000516373 109 ntBASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms