Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-5A0A0J9YX44 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV5-5A0A0J9YX44 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV5-5A0A0J9YX44 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.27■□□□□ 0.36
TRBV5-5A0A0J9YX44 KRT18P61-201ENST00000585825 1298 ntBASIC17.27■□□□□ 0.36
TRBV5-5A0A0J9YX44 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV5-5A0A0J9YX44 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRBV5-5A0A0J9YX44 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV5-5A0A0J9YX44 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV5-5A0A0J9YX44 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 TERF1P5-201ENST00000477545 1207 ntBASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 AL162412.1-201ENST00000567129 965 ntBASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
TRBV5-5A0A0J9YX44 LINC01465-201ENST00000408887 1940 ntBASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 KRT8P20-201ENST00000423953 1409 ntBASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-5A0A0J9YX44 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV5-5A0A0J9YX44 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV5-5A0A0J9YX44 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms