Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 AC093827.2-201ENST00000512654 315 ntBASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 PRKY-204ENST00000533551 1019 ntBASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 AL023875.1-201ENST00000640777 796 ntBASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IGHV4-28A0A0C4DH34 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 AP006294.2-201ENST00000641667 209 ntBASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 SMG8-203ENST00000578922 2178 ntBASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
IGHV4-28A0A0C4DH34 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 ISG20-202ENST00000379224 540 ntTSL 3 BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 KRASP1-201ENST00000407852 552 ntBASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 UBE2SP1-201ENST00000450587 669 ntBASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 AL121906.2-201ENST00000621597 723 ntBASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
IGHV4-28A0A0C4DH34 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
IGHV4-28A0A0C4DH34 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms