Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC005332.7-201ENST00000614046 2005 ntBASIC16.01■□□□□ 0.15
TRAV3A0A0B4J244 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 GOLGA2P11-201ENST00000562660 1621 ntBASIC16■□□□□ 0.15
TRAV3A0A0B4J244 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
TRAV3A0A0B4J244 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 KRT18P68-201ENST00000392293 1000 ntBASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 AC026271.2-201ENST00000428091 497 ntBASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 AC100791.3-201ENST00000617619 330 ntBASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 AC105020.6-201ENST00000621523 1217 ntBASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV3A0A0B4J244 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 AC006015.1-201ENST00000429970 570 ntBASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 AC009237.14-201ENST00000609975 1594 ntBASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 AC018445.3-201ENST00000624177 1945 ntBASIC15.98■□□□□ 0.15
TRAV3A0A0B4J244 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 CYP2T1P-201ENST00000432607 1285 ntBASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 AL031963.3-201ENST00000606441 850 ntBASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TRAV3A0A0B4J244 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms