Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 AC245052.3-201ENST00000450182 901 ntBASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 BCL2-203ENST00000589955 5011 ntBASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 PKD1P1-201ENST00000458669 6805 ntBASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 AC061975.6-201ENST00000579045 1553 ntBASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 MYCNOS-205ENST00000641950 531 ntBASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 UBE2DNL-204ENST00000602536 740 ntBASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 BID-214ENST00000617586 542 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV8-3A0A0A6YYJ7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms