Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV9-1A0A075B6T8 DPP3P2-201ENST00000416030 1696 ntBASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV9-1A0A075B6T8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 BHLHE23-202ENST00000612929 1109 ntBASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV9-1A0A075B6T8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 AP004607.4-201ENST00000530158 1459 ntBASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAV9-1A0A075B6T8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 PVT1_1.1-201ENST00000615125 194 ntBASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
TRAV9-1A0A075B6T8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms