Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC002540.1-201ENST00000625023 1349 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 IGBP1-AS1-201ENST00000366397 542 ntTSL 5 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 TMEM244-201ENST00000368143 545 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC013429.2-201ENST00000418798 781 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 GACAT1-201ENST00000419650 577 ntTSL 4 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC006960.1-201ENST00000419980 153 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AL606490.7-201ENST00000433136 191 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 KDM4A-AS1-203ENST00000434346 833 ntTSL 5 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 HMGB1P31-201ENST00000437242 427 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC093157.1-205ENST00000449473 1298 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 HAUS6P3-201ENST00000456660 1107 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 RN7SL77P-201ENST00000473332 294 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC008837.1-201ENST00000511513 412 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC025881.1-201ENST00000518851 512 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AP003499.1-201ENST00000527217 574 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC004923.2-201ENST00000529649 369 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 DUXAP1-201ENST00000556632 463 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 CFAP52-208ENST00000576499 711 ntTSL 3 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 ABBA01006766.1-201ENST00000584728 294 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC024451.4-201ENST00000602578 752 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AL021878.2-201ENST00000602718 399 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 U73023.1-201ENST00000603134 700 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC073218.2-201ENST00000606468 295 ntTSL 5 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC009686.2-201ENST00000607017 577 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 CDC37L1-AS1-201ENST00000607997 463 ntTSL 5 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC004948.1-201ENST00000609858 672 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC009237.15-201ENST00000610252 501 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC018926.2-201ENST00000611214 498 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 RBM22P6-201ENST00000611682 867 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC080112.3-201ENST00000612552 880 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 CARMN-212ENST00000614896 536 ntTSL 5 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 ZNHIT3-204ENST00000617429 951 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AP005264.7-201ENST00000625003 745 ntBASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 CASP7-207ENST00000452490 2271 ntTSL 2 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC8.15□□□□□ -1.1
CUEDC1Q9NWM3 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC8.15□□□□□ -1.11
CUEDC1Q9NWM3 AC012513.3-201ENST00000623250 2116 ntBASIC8.15□□□□□ -1.11
CUEDC1Q9NWM3 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
CUEDC1Q9NWM3 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
CUEDC1Q9NWM3 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
CUEDC1Q9NWM3 FLT1-203ENST00000540678 1927 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CUEDC1Q9NWM3 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
CUEDC1Q9NWM3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CUEDC1Q9NWM3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
CUEDC1Q9NWM3 MS4A6A-203ENST00000426738 1736 ntTSL 5 BASIC8.15□□□□□ -1.11
CUEDC1Q9NWM3 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC8.15□□□□□ -1.11
CUEDC1Q9NWM3 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC8.15□□□□□ -1.11
CUEDC1Q9NWM3 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
CUEDC1Q9NWM3 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC008817.1-201ENST00000504215 1562 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC022306.1-201ENST00000560489 1562 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AMBN-202ENST00000449493 1512 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 PRSS51-203ENST00000636217 2255 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 LINC01260-201ENST00000415889 1416 ntTSL 5 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 TRIM48-201ENST00000417545 1445 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 SEC62-207ENST00000480708 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 ZNF192P2-201ENST00000402215 1383 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 TFIP11-217ENST00000619735 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 RXFP2-202ENST00000380314 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 MIR146B-201ENST00000365699 73 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AC234778.1-201ENST00000399253 370 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 NPM1P38-201ENST00000403835 865 ntBASIC8.14□□□□□ -1.11
CUEDC1Q9NWM3 AL590002.1-201ENST00000406554 418 ntBASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms