RNA–Protein interactions for RNA: ENST00000406554.2

AL590002.1-201, humanhuman

BASIC

Gene AL590002.1, Length 418 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL590002.1-201ENST00000406554 AEBP2Q6ZN18 517 aaPredicted RBP24.58■■□□□ 1.53
AL590002.1-201ENST00000406554 CHIC1Q5VXU3 224 aa23.28■■□□□ 1.32
AL590002.1-201ENST00000406554 SENP3Q9H4L4 574 aaPredicted RBP20.86■□□□□ 0.93
AL590002.1-201ENST00000406554 PHF23Q9BUL5 403 aaPredicted RBP20.67■□□□□ 0.9
AL590002.1-201ENST00000406554 FOXD1Q16676 465 aa19.52■□□□□ 0.72
AL590002.1-201ENST00000406554 PLPPR3Q6T4P5 718 aa18.58■□□□□ 0.56
AL590002.1-201ENST00000406554 PPP6R1Q9UPN7 881 aa18.32■□□□□ 0.52
AL590002.1-201ENST00000406554 ADRA2BP18089 450 aa18.27■□□□□ 0.52
AL590002.1-201ENST00000406554 PIAS4Q8N2W9 510 aaPredicted RBP18.25■□□□□ 0.51
AL590002.1-201ENST00000406554 MSH5O43196 834 aa18.17■□□□□ 0.5
AL590002.1-201ENST00000406554 POTEDQ86YR6 584 aa17.81■□□□□ 0.44
AL590002.1-201ENST00000406554 MAPK8IP2Q13387 824 aaPredicted RBP16.8■□□□□ 0.28
AL590002.1-201ENST00000406554 SCAF1Q9H7N4 1312 aaKnown RBP16.57■□□□□ 0.24
AL590002.1-201ENST00000406554 DMRT2Q9Y5R5 561 aa16.56■□□□□ 0.24
AL590002.1-201ENST00000406554 PPP4R3CPQ6ZMV5 832 aa16.34■□□□□ 0.21
AL590002.1-201ENST00000406554 DCAF8L1A6NGE4 600 aa16■□□□□ 0.15
AL590002.1-201ENST00000406554 CNKSR2Q8WXI2 1034 aa15.99■□□□□ 0.15
AL590002.1-201ENST00000406554 HOXD11P31277 338 aaPredicted RBP15.94■□□□□ 0.14
AL590002.1-201ENST00000406554 RNF216Q9NWF9 866 aaPredicted RBP15.82■□□□□ 0.12
AL590002.1-201ENST00000406554 CACNB1Q02641 598 aaPredicted RBP15.67■□□□□ 0.1
AL590002.1-201ENST00000406554 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
AL590002.1-201ENST00000406554 RNF39Q9H2S5 420 aa15.55■□□□□ 0.08
AL590002.1-201ENST00000406554 NPM3O75607 178 aaKnown RBP15.5■□□□□ 0.07
AL590002.1-201ENST00000406554 C1QBPQ07021 282 aaKnown RBP15.28■□□□□ 0.04
AL590002.1-201ENST00000406554 DNAJC5BQ9UF47 199 aa15.28■□□□□ 0.04
AL590002.1-201ENST00000406554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.26■□□□□ 0.03
AL590002.1-201ENST00000406554 KCNA4P22459 653 aa15.25■□□□□ 0.03
AL590002.1-201ENST00000406554 U3KPZ7 1027 aaPredicted RBP14.93□□□□□ -0.02
AL590002.1-201ENST00000406554 SLC4A2P04920 1241 aa14.81□□□□□ -0.04
AL590002.1-201ENST00000406554 SPINK5Q9NQ38 1064 aaPredicted RBP14.76□□□□□ -0.05
AL590002.1-201ENST00000406554 CAPN15O75808 1086 aa14.71□□□□□ -0.05
AL590002.1-201ENST00000406554 DSG3P32926 999 aa14.59□□□□□ -0.07
AL590002.1-201ENST00000406554 TRHP20396 242 aaPredicted RBP14.5□□□□□ -0.09
AL590002.1-201ENST00000406554 ABCB7O75027 752 aa14.42□□□□□ -0.1
AL590002.1-201ENST00000406554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.41□□□□□ -0.1
AL590002.1-201ENST00000406554 HNRNPUL2Q1KMD3 747 aaKnown RBP14.41□□□□□ -0.1
AL590002.1-201ENST00000406554 APLP2Q06481 763 aa14.39□□□□□ -0.11
AL590002.1-201ENST00000406554 SLC4A1APQ9BWU0 796 aaKnown RBP14.37□□□□□ -0.11
AL590002.1-201ENST00000406554 ZNF219Q9P2Y4 722 aaPredicted RBP14.36□□□□□ -0.11
AL590002.1-201ENST00000406554 SAMD1Q6SPF0 538 aaPredicted RBP14.35□□□□□ -0.11
AL590002.1-201ENST00000406554 MYCNP04198 464 aaPredicted RBP14.28□□□□□ -0.12
AL590002.1-201ENST00000406554 FOXD4L1Q9NU39 408 aa14.15□□□□□ -0.14
AL590002.1-201ENST00000406554 POLA2Q14181 598 aa14.1□□□□□ -0.15
AL590002.1-201ENST00000406554 ATF5Q9Y2D1 282 aaPredicted RBP14.07□□□□□ -0.16
AL590002.1-201ENST00000406554 ZBTB22O15209 634 aa14.04□□□□□ -0.16
AL590002.1-201ENST00000406554 POTEHQ6S545 545 aa13.95□□□□□ -0.18
AL590002.1-201ENST00000406554 RBM42Q9BTD8 480 aaKnown RBP13.83□□□□□ -0.2
AL590002.1-201ENST00000406554 ZBTB12Q9Y330 459 aaPredicted RBP13.68□□□□□ -0.22
AL590002.1-201ENST00000406554 ATXN8OSP0DMR3 200 aa13.66□□□□□ -0.22
AL590002.1-201ENST00000406554 OSCARQ8IYS5 282 aa13.65□□□□□ -0.22
AL590002.1-201ENST00000406554 CHRDL2Q6WN34 429 aa13.61□□□□□ -0.23
AL590002.1-201ENST00000406554 AKT1S1Q96B36 256 aa13.55□□□□□ -0.24
AL590002.1-201ENST00000406554 REM2Q8IYK8 340 aaPredicted RBP13.49□□□□□ -0.25
AL590002.1-201ENST00000406554 FBLN2P98095 1184 aa13.41□□□□□ -0.26
AL590002.1-201ENST00000406554 MKRN4PQ13434 485 aaPredicted RBP13.38□□□□□ -0.27
AL590002.1-201ENST00000406554 CSRNP3Q8WYN3 585 aa13.38□□□□□ -0.27
AL590002.1-201ENST00000406554 PITPNM1O00562 1244 aa13.35□□□□□ -0.27
AL590002.1-201ENST00000406554 PIP4P2Q8N4L2 257 aa13.31□□□□□ -0.28
AL590002.1-201ENST00000406554 SPDYE2BA6NHP3 402 aa13.29□□□□□ -0.28
AL590002.1-201ENST00000406554 SPDYE6P0CI01 402 aa13.29□□□□□ -0.28
AL590002.1-201ENST00000406554 SPDYE2Q495Y8 402 aa13.29□□□□□ -0.28
AL590002.1-201ENST00000406554 EHMT2Q96KQ7 1210 aa13.28□□□□□ -0.28
AL590002.1-201ENST00000406554 ZNF692Q9BU19 519 aaPredicted RBP13.21□□□□□ -0.29
AL590002.1-201ENST00000406554 FXR2P51116 673 aaKnown RBP eCLIP13.19□□□□□ -0.3
AL590002.1-201ENST00000406554 CLEC11AQ9Y240 323 aa13.15□□□□□ -0.3
AL590002.1-201ENST00000406554 SSUH2Q9Y2M2 353 aa13.13□□□□□ -0.31
AL590002.1-201ENST00000406554 HAX1O00165 279 aa13.08□□□□□ -0.32
AL590002.1-201ENST00000406554 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
AL590002.1-201ENST00000406554 SP7Q8TDD2 431 aaPredicted RBP13.06□□□□□ -0.32
AL590002.1-201ENST00000406554 PABPN1Q86U42 306 aaKnown RBP eCLIP13.03□□□□□ -0.32
AL590002.1-201ENST00000406554 PRKAR2AP13861 404 aaKnown RBP13.01□□□□□ -0.33
AL590002.1-201ENST00000406554 EVX2Q03828 476 aa12.97□□□□□ -0.33
AL590002.1-201ENST00000406554 CHADLQ6NUI6 762 aa12.92□□□□□ -0.34
AL590002.1-201ENST00000406554 PRR29P0C7W0 189 aa12.89□□□□□ -0.35
AL590002.1-201ENST00000406554 C19orf67A6NJJ6 358 aa12.77□□□□□ -0.37
AL590002.1-201ENST00000406554 SPDYE4A6NLX3 237 aa12.74□□□□□ -0.37
AL590002.1-201ENST00000406554 FARP1Q9Y4F1 1045 aaPredicted RBP12.66□□□□□ -0.38
AL590002.1-201ENST00000406554 GABBR2O75899 941 aa12.61□□□□□ -0.39
AL590002.1-201ENST00000406554 CD44P16070 742 aaKnown RBP12.58□□□□□ -0.4
AL590002.1-201ENST00000406554 CREBZFQ9NS37 354 aa12.58□□□□□ -0.4
AL590002.1-201ENST00000406554 STAG3Q9UJ98 1225 aa12.57□□□□□ -0.4
AL590002.1-201ENST00000406554 ZRANB1Q9UGI0 708 aa12.43□□□□□ -0.42
AL590002.1-201ENST00000406554 POTEIP0CG38 1075 aa12.37□□□□□ -0.43
AL590002.1-201ENST00000406554 MNX1P50219 401 aaPredicted RBP12.35□□□□□ -0.43
AL590002.1-201ENST00000406554 PROM2Q8N271 834 aa12.35□□□□□ -0.43
AL590002.1-201ENST00000406554 ZNF579Q8NAF0 562 aaKnown RBP12.34□□□□□ -0.43
AL590002.1-201ENST00000406554 NPM1P06748 294 aaKnown RBP eCLIP12.29□□□□□ -0.44
AL590002.1-201ENST00000406554 PHF12Q96QT6 1004 aa12.29□□□□□ -0.44
AL590002.1-201ENST00000406554 LHX8Q68G74 356 aa12.28□□□□□ -0.44
AL590002.1-201ENST00000406554 GALR2O43603 387 aaPredicted RBP12.27□□□□□ -0.45
AL590002.1-201ENST00000406554 DCBLD2Q96PD2 775 aa12.27□□□□□ -0.45
AL590002.1-201ENST00000406554 PAK3O75914 559 aaPredicted RBP12.26□□□□□ -0.45
AL590002.1-201ENST00000406554 CLCN6P51797 869 aa12.25□□□□□ -0.45
AL590002.1-201ENST00000406554 MIER1Q8N108 512 aa12.18□□□□□ -0.46
AL590002.1-201ENST00000406554 TSPYL2Q9H2G4 693 aaPredicted RBP12.17□□□□□ -0.46
AL590002.1-201ENST00000406554 FKBP8Q14318 412 aa12.15□□□□□ -0.46
AL590002.1-201ENST00000406554 MS4A3Q96HJ5 214 aa12.09□□□□□ -0.47
AL590002.1-201ENST00000406554 PLEKHG5O94827 1062 aa12.07□□□□□ -0.48
AL590002.1-201ENST00000406554 PLCD3Q8N3E9 789 aa12.07□□□□□ -0.48
AL590002.1-201ENST00000406554 PELP1Q8IZL8 1130 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 184.6 ms