RNA–Protein interactions for RNA: ENST00000306621.7

CXCL11-201, Transcript of C-X-C motif chemokine ligand 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL11, Length 1,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL11-201ENST00000306621 AEBP2Q6ZN18 517 aaPredicted RBP26.55■■□□□ 1.84
CXCL11-201ENST00000306621 CHIC1Q5VXU3 224 aa24.9■■□□□ 1.58
CXCL11-201ENST00000306621 SENP3Q9H4L4 574 aaPredicted RBP22.84■■□□□ 1.25
CXCL11-201ENST00000306621 PHF23Q9BUL5 403 aaPredicted RBP22.41■■□□□ 1.18
CXCL11-201ENST00000306621 FOXD1Q16676 465 aa21.3■■□□□ 1
CXCL11-201ENST00000306621 POTEDQ86YR6 584 aa20.77■□□□□ 0.92
CXCL11-201ENST00000306621 MSH5O43196 834 aa20.25■□□□□ 0.83
CXCL11-201ENST00000306621 PIAS4Q8N2W9 510 aaPredicted RBP19.76■□□□□ 0.75
CXCL11-201ENST00000306621 PLPPR3Q6T4P5 718 aa19.45■□□□□ 0.7
CXCL11-201ENST00000306621 PPP6R1Q9UPN7 881 aa19.4■□□□□ 0.7
CXCL11-201ENST00000306621 ADRA2BP18089 450 aa19.31■□□□□ 0.68
CXCL11-201ENST00000306621 DMRT2Q9Y5R5 561 aa18■□□□□ 0.47
CXCL11-201ENST00000306621 MAPK8IP2Q13387 824 aaPredicted RBP17.91■□□□□ 0.46
CXCL11-201ENST00000306621 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
CXCL11-201ENST00000306621 CACNB1Q02641 598 aaPredicted RBP17.72■□□□□ 0.43
CXCL11-201ENST00000306621 DCAF8L1A6NGE4 600 aa17.25■□□□□ 0.35
CXCL11-201ENST00000306621 RNF39Q9H2S5 420 aa17.18■□□□□ 0.34
CXCL11-201ENST00000306621 HOXD11P31277 338 aaPredicted RBP17.1■□□□□ 0.33
CXCL11-201ENST00000306621 C1QBPQ07021 282 aaKnown RBP16.94■□□□□ 0.3
CXCL11-201ENST00000306621 PPP4R3CPQ6ZMV5 832 aa16.94■□□□□ 0.3
CXCL11-201ENST00000306621 RNF216Q9NWF9 866 aaPredicted RBP16.81■□□□□ 0.28
CXCL11-201ENST00000306621 CNKSR2Q8WXI2 1034 aa16.8■□□□□ 0.28
CXCL11-201ENST00000306621 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.27
CXCL11-201ENST00000306621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.27■□□□□ 0.2
CXCL11-201ENST00000306621 POTEHQ6S545 545 aa16.16■□□□□ 0.18
CXCL11-201ENST00000306621 NCBP3Q53F19 620 aaKnown RBP16.16■□□□□ 0.18
CXCL11-201ENST00000306621 DSG3P32926 999 aa15.86■□□□□ 0.13
CXCL11-201ENST00000306621 NPM3O75607 178 aaKnown RBP15.85■□□□□ 0.13
CXCL11-201ENST00000306621 U3KPZ7 1027 aaPredicted RBP15.83■□□□□ 0.13
CXCL11-201ENST00000306621 CAPN15O75808 1086 aa15.8■□□□□ 0.12
CXCL11-201ENST00000306621 SPINK5Q9NQ38 1064 aaPredicted RBP15.76■□□□□ 0.11
CXCL11-201ENST00000306621 APLP2Q06481 763 aa15.45■□□□□ 0.06
CXCL11-201ENST00000306621 ZNF219Q9P2Y4 722 aaPredicted RBP15.39■□□□□ 0.05
CXCL11-201ENST00000306621 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
CXCL11-201ENST00000306621 ABCB7O75027 752 aa15.35■□□□□ 0.05
CXCL11-201ENST00000306621 SLC4A2P04920 1241 aa15.28■□□□□ 0.04
CXCL11-201ENST00000306621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
CXCL11-201ENST00000306621 HNRNPUL2Q1KMD3 747 aaKnown RBP15.26■□□□□ 0.03
CXCL11-201ENST00000306621 RBM42Q9BTD8 480 aaKnown RBP15.22■□□□□ 0.03
CXCL11-201ENST00000306621 SAMD1Q6SPF0 538 aaPredicted RBP15.12■□□□□ 0.01
CXCL11-201ENST00000306621 CHRDL2Q6WN34 429 aa15.08■□□□□ 0
CXCL11-201ENST00000306621 KCNA4P22459 653 aa14.95□□□□□ -0.02
CXCL11-201ENST00000306621 SP7Q8TDD2 431 aaPredicted RBP14.87□□□□□ -0.03
CXCL11-201ENST00000306621 POLA2Q14181 598 aa14.84□□□□□ -0.03
CXCL11-201ENST00000306621 AKT1S1Q96B36 256 aa14.72□□□□□ -0.05
CXCL11-201ENST00000306621 MYCNP04198 464 aaPredicted RBP14.71□□□□□ -0.05
CXCL11-201ENST00000306621 ZBTB12Q9Y330 459 aaPredicted RBP14.59□□□□□ -0.07
CXCL11-201ENST00000306621 PIP4P2Q8N4L2 257 aa14.58□□□□□ -0.08
CXCL11-201ENST00000306621 REM2Q8IYK8 340 aaPredicted RBP14.55□□□□□ -0.08
CXCL11-201ENST00000306621 HAX1O00165 279 aa14.49□□□□□ -0.09
CXCL11-201ENST00000306621 FXR2P51116 673 aaKnown RBP eCLIP14.42□□□□□ -0.1
CXCL11-201ENST00000306621 PITPNM1O00562 1244 aa14.39□□□□□ -0.11
CXCL11-201ENST00000306621 OSCARQ8IYS5 282 aa14.37□□□□□ -0.11
CXCL11-201ENST00000306621 ATF5Q9Y2D1 282 aaPredicted RBP14.33□□□□□ -0.11
CXCL11-201ENST00000306621 EVX2Q03828 476 aa14.21□□□□□ -0.13
CXCL11-201ENST00000306621 FOXD4L1Q9NU39 408 aa14.2□□□□□ -0.14
CXCL11-201ENST00000306621 SPDYE2BA6NHP3 402 aa14.04□□□□□ -0.16
CXCL11-201ENST00000306621 SPDYE6P0CI01 402 aa14.04□□□□□ -0.16
CXCL11-201ENST00000306621 SPDYE2Q495Y8 402 aa14.04□□□□□ -0.16
CXCL11-201ENST00000306621 SLC4A1APQ9BWU0 796 aaKnown RBP14.03□□□□□ -0.16
CXCL11-201ENST00000306621 PRKAR2AP13861 404 aaKnown RBP14.01□□□□□ -0.17
CXCL11-201ENST00000306621 C19orf67A6NJJ6 358 aa13.98□□□□□ -0.17
CXCL11-201ENST00000306621 SPDYE1Q8NFV5 336 aaPredicted RBP13.95□□□□□ -0.18
CXCL11-201ENST00000306621 LHX8Q68G74 356 aa13.93□□□□□ -0.18
CXCL11-201ENST00000306621 FBLN2P98095 1184 aa13.93□□□□□ -0.18
CXCL11-201ENST00000306621 GABBR2O75899 941 aa13.9□□□□□ -0.18
CXCL11-201ENST00000306621 CLEC11AQ9Y240 323 aa13.9□□□□□ -0.18
CXCL11-201ENST00000306621 ATXN8OSP0DMR3 200 aa13.89□□□□□ -0.19
CXCL11-201ENST00000306621 SSUH2Q9Y2M2 353 aa13.77□□□□□ -0.21
CXCL11-201ENST00000306621 ZNF692Q9BU19 519 aaPredicted RBP13.75□□□□□ -0.21
CXCL11-201ENST00000306621 ZBTB22O15209 634 aa13.71□□□□□ -0.22
CXCL11-201ENST00000306621 CHADLQ6NUI6 762 aa13.68□□□□□ -0.22
CXCL11-201ENST00000306621 MKRN4PQ13434 485 aaPredicted RBP13.67□□□□□ -0.22
CXCL11-201ENST00000306621 PRR29P0C7W0 189 aa13.61□□□□□ -0.23
CXCL11-201ENST00000306621 POTEIP0CG38 1075 aa13.59□□□□□ -0.23
CXCL11-201ENST00000306621 CLCN6P51797 869 aa13.59□□□□□ -0.23
CXCL11-201ENST00000306621 CD44P16070 742 aaKnown RBP13.53□□□□□ -0.24
CXCL11-201ENST00000306621 PLSCR2Q9NRY7 297 aa13.53□□□□□ -0.24
CXCL11-201ENST00000306621 PABPN1Q86U42 306 aaKnown RBP eCLIP13.5□□□□□ -0.25
CXCL11-201ENST00000306621 FARP1Q9Y4F1 1045 aaPredicted RBP13.46□□□□□ -0.25
CXCL11-201ENST00000306621 DCBLD2Q96PD2 775 aa13.42□□□□□ -0.26
CXCL11-201ENST00000306621 ZNF579Q8NAF0 562 aaKnown RBP13.32□□□□□ -0.28
CXCL11-201ENST00000306621 ZRANB1Q9UGI0 708 aa13.24□□□□□ -0.29
CXCL11-201ENST00000306621 OTUD5Q96G74 571 aa13.21□□□□□ -0.29
CXCL11-201ENST00000306621 GALR2O43603 387 aaPredicted RBP13.15□□□□□ -0.3
CXCL11-201ENST00000306621 POTEMA6NI47 508 aa13.13□□□□□ -0.31
CXCL11-201ENST00000306621 CREBZFQ9NS37 354 aa13.12□□□□□ -0.31
CXCL11-201ENST00000306621 POTEB2H3BUK9 544 aa13.1□□□□□ -0.31
CXCL11-201ENST00000306621 STAG3Q9UJ98 1225 aa13.09□□□□□ -0.31
CXCL11-201ENST00000306621 POTEGQ6S5H5 508 aa13.08□□□□□ -0.32
CXCL11-201ENST00000306621 PCDH10Q9P2E7 1040 aa13.06□□□□□ -0.32
CXCL11-201ENST00000306621 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
CXCL11-201ENST00000306621 PHF12Q96QT6 1004 aa12.98□□□□□ -0.33
CXCL11-201ENST00000306621 PELP1Q8IZL8 1130 aaKnown RBP12.95□□□□□ -0.34
CXCL11-201ENST00000306621 NPM1P06748 294 aaKnown RBP eCLIP12.91□□□□□ -0.34
CXCL11-201ENST00000306621 MAMSTRQ6ZN01 415 aa12.89□□□□□ -0.35
CXCL11-201ENST00000306621 METRNQ9UJH8 293 aa12.89□□□□□ -0.35
CXCL11-201ENST00000306621 C7P10643 843 aa12.88□□□□□ -0.35
CXCL11-201ENST00000306621 ASTLQ6HA08 431 aaPredicted RBP12.88□□□□□ -0.35
CXCL11-201ENST00000306621 SLC39A7Q92504 469 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms