RNA–Protein interactions for RNA: ENST00000412424.1

AC009411.1-202, humanhuman

TSL 4 BASIC

Gene AC009411.1, Length 548 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009411.1-202ENST00000412424 AEBP2Q6ZN18 517 aaPredicted RBP25.11■■□□□ 1.61
AC009411.1-202ENST00000412424 CHIC1Q5VXU3 224 aa23.68■■□□□ 1.38
AC009411.1-202ENST00000412424 SENP3Q9H4L4 574 aaPredicted RBP21.4■■□□□ 1.02
AC009411.1-202ENST00000412424 PHF23Q9BUL5 403 aaPredicted RBP21.12■□□□□ 0.97
AC009411.1-202ENST00000412424 FOXD1Q16676 465 aa19.99■□□□□ 0.79
AC009411.1-202ENST00000412424 PLPPR3Q6T4P5 718 aa18.84■□□□□ 0.61
AC009411.1-202ENST00000412424 MSH5O43196 834 aa18.71■□□□□ 0.59
AC009411.1-202ENST00000412424 PIAS4Q8N2W9 510 aaPredicted RBP18.63■□□□□ 0.57
AC009411.1-202ENST00000412424 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
AC009411.1-202ENST00000412424 ADRA2BP18089 450 aa18.54■□□□□ 0.56
AC009411.1-202ENST00000412424 POTEDQ86YR6 584 aa18.54■□□□□ 0.56
AC009411.1-202ENST00000412424 MAPK8IP2Q13387 824 aaPredicted RBP17.08■□□□□ 0.32
AC009411.1-202ENST00000412424 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
AC009411.1-202ENST00000412424 SCAF1Q9H7N4 1312 aaKnown RBP16.91■□□□□ 0.3
AC009411.1-202ENST00000412424 PPP4R3CPQ6ZMV5 832 aa16.52■□□□□ 0.24
AC009411.1-202ENST00000412424 HOXD11P31277 338 aaPredicted RBP16.28■□□□□ 0.2
AC009411.1-202ENST00000412424 DCAF8L1A6NGE4 600 aa16.27■□□□□ 0.2
AC009411.1-202ENST00000412424 CNKSR2Q8WXI2 1034 aa16.22■□□□□ 0.19
AC009411.1-202ENST00000412424 CACNB1Q02641 598 aaPredicted RBP16.16■□□□□ 0.18
AC009411.1-202ENST00000412424 RNF216Q9NWF9 866 aaPredicted RBP16.11■□□□□ 0.17
AC009411.1-202ENST00000412424 RNF39Q9H2S5 420 aa15.99■□□□□ 0.15
AC009411.1-202ENST00000412424 NCBP3Q53F19 620 aaKnown RBP15.82■□□□□ 0.12
AC009411.1-202ENST00000412424 C1QBPQ07021 282 aaKnown RBP15.73■□□□□ 0.11
AC009411.1-202ENST00000412424 DNAJC5BQ9UF47 199 aa15.72■□□□□ 0.11
AC009411.1-202ENST00000412424 NPM3O75607 178 aaKnown RBP15.62■□□□□ 0.09
AC009411.1-202ENST00000412424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.51■□□□□ 0.07
AC009411.1-202ENST00000412424 KCNA4P22459 653 aa15.22■□□□□ 0.03
AC009411.1-202ENST00000412424 U3KPZ7 1027 aaPredicted RBP15.18■□□□□ 0.02
AC009411.1-202ENST00000412424 SPINK5Q9NQ38 1064 aaPredicted RBP15.02■□□□□ -0
AC009411.1-202ENST00000412424 CAPN15O75808 1086 aa14.97□□□□□ -0.01
AC009411.1-202ENST00000412424 SLC4A2P04920 1241 aa14.97□□□□□ -0.01
AC009411.1-202ENST00000412424 DSG3P32926 999 aa14.93□□□□□ -0.02
AC009411.1-202ENST00000412424 TRHP20396 242 aaPredicted RBP14.71□□□□□ -0.05
AC009411.1-202ENST00000412424 APLP2Q06481 763 aa14.68□□□□□ -0.06
AC009411.1-202ENST00000412424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.65□□□□□ -0.06
AC009411.1-202ENST00000412424 HNRNPUL2Q1KMD3 747 aaKnown RBP14.65□□□□□ -0.06
AC009411.1-202ENST00000412424 ZNF219Q9P2Y4 722 aaPredicted RBP14.64□□□□□ -0.07
AC009411.1-202ENST00000412424 ABCB7O75027 752 aa14.63□□□□□ -0.07
AC009411.1-202ENST00000412424 SAMD1Q6SPF0 538 aaPredicted RBP14.58□□□□□ -0.08
AC009411.1-202ENST00000412424 POTEHQ6S545 545 aa14.49□□□□□ -0.09
AC009411.1-202ENST00000412424 MYCNP04198 464 aaPredicted RBP14.43□□□□□ -0.1
AC009411.1-202ENST00000412424 SLC4A1APQ9BWU0 796 aaKnown RBP14.31□□□□□ -0.12
AC009411.1-202ENST00000412424 POLA2Q14181 598 aa14.29□□□□□ -0.12
AC009411.1-202ENST00000412424 RBM42Q9BTD8 480 aaKnown RBP14.21□□□□□ -0.13
AC009411.1-202ENST00000412424 FOXD4L1Q9NU39 408 aa14.2□□□□□ -0.14
AC009411.1-202ENST00000412424 ATF5Q9Y2D1 282 aaPredicted RBP14.16□□□□□ -0.14
AC009411.1-202ENST00000412424 ZBTB22O15209 634 aa14□□□□□ -0.17
AC009411.1-202ENST00000412424 CHRDL2Q6WN34 429 aa13.98□□□□□ -0.17
AC009411.1-202ENST00000412424 ZBTB12Q9Y330 459 aaPredicted RBP13.95□□□□□ -0.18
AC009411.1-202ENST00000412424 AKT1S1Q96B36 256 aa13.87□□□□□ -0.19
AC009411.1-202ENST00000412424 OSCARQ8IYS5 282 aa13.84□□□□□ -0.19
AC009411.1-202ENST00000412424 ATXN8OSP0DMR3 200 aa13.78□□□□□ -0.2
AC009411.1-202ENST00000412424 REM2Q8IYK8 340 aaPredicted RBP13.77□□□□□ -0.21
AC009411.1-202ENST00000412424 PIP4P2Q8N4L2 257 aa13.63□□□□□ -0.23
AC009411.1-202ENST00000412424 PITPNM1O00562 1244 aa13.62□□□□□ -0.23
AC009411.1-202ENST00000412424 FBLN2P98095 1184 aa13.56□□□□□ -0.24
AC009411.1-202ENST00000412424 SPDYE2BA6NHP3 402 aa13.52□□□□□ -0.25
AC009411.1-202ENST00000412424 SPDYE6P0CI01 402 aa13.52□□□□□ -0.25
AC009411.1-202ENST00000412424 FXR2P51116 673 aaKnown RBP eCLIP13.52□□□□□ -0.25
AC009411.1-202ENST00000412424 SPDYE2Q495Y8 402 aa13.52□□□□□ -0.25
AC009411.1-202ENST00000412424 SP7Q8TDD2 431 aaPredicted RBP13.52□□□□□ -0.25
AC009411.1-202ENST00000412424 MKRN4PQ13434 485 aaPredicted RBP13.49□□□□□ -0.25
AC009411.1-202ENST00000412424 HAX1O00165 279 aa13.42□□□□□ -0.26
AC009411.1-202ENST00000412424 ZNF692Q9BU19 519 aaPredicted RBP13.35□□□□□ -0.27
AC009411.1-202ENST00000412424 SSUH2Q9Y2M2 353 aa13.34□□□□□ -0.27
AC009411.1-202ENST00000412424 SPDYE1Q8NFV5 336 aaPredicted RBP13.32□□□□□ -0.28
AC009411.1-202ENST00000412424 CLEC11AQ9Y240 323 aa13.31□□□□□ -0.28
AC009411.1-202ENST00000412424 EVX2Q03828 476 aa13.27□□□□□ -0.29
AC009411.1-202ENST00000412424 PRKAR2AP13861 404 aaKnown RBP13.26□□□□□ -0.29
AC009411.1-202ENST00000412424 CSRNP3Q8WYN3 585 aa13.22□□□□□ -0.29
AC009411.1-202ENST00000412424 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
AC009411.1-202ENST00000412424 C19orf67A6NJJ6 358 aa13.09□□□□□ -0.31
AC009411.1-202ENST00000412424 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
AC009411.1-202ENST00000412424 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
AC009411.1-202ENST00000412424 EHMT2Q96KQ7 1210 aa12.97□□□□□ -0.33
AC009411.1-202ENST00000412424 GABBR2O75899 941 aa12.94□□□□□ -0.34
AC009411.1-202ENST00000412424 FARP1Q9Y4F1 1045 aaPredicted RBP12.87□□□□□ -0.35
AC009411.1-202ENST00000412424 CD44P16070 742 aaKnown RBP12.82□□□□□ -0.36
AC009411.1-202ENST00000412424 SPDYE4A6NLX3 237 aa12.76□□□□□ -0.37
AC009411.1-202ENST00000412424 CREBZFQ9NS37 354 aa12.73□□□□□ -0.37
AC009411.1-202ENST00000412424 STAG3Q9UJ98 1225 aa12.73□□□□□ -0.37
AC009411.1-202ENST00000412424 POTEIP0CG38 1075 aa12.68□□□□□ -0.38
AC009411.1-202ENST00000412424 LHX8Q68G74 356 aa12.68□□□□□ -0.38
AC009411.1-202ENST00000412424 CLCN6P51797 869 aa12.64□□□□□ -0.39
AC009411.1-202ENST00000412424 ZNF579Q8NAF0 562 aaKnown RBP12.62□□□□□ -0.39
AC009411.1-202ENST00000412424 ZRANB1Q9UGI0 708 aa12.62□□□□□ -0.39
AC009411.1-202ENST00000412424 DCBLD2Q96PD2 775 aa12.54□□□□□ -0.4
AC009411.1-202ENST00000412424 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
AC009411.1-202ENST00000412424 GALR2O43603 387 aaPredicted RBP12.49□□□□□ -0.41
AC009411.1-202ENST00000412424 PAK3O75914 559 aaPredicted RBP12.46□□□□□ -0.41
AC009411.1-202ENST00000412424 NPM1P06748 294 aaKnown RBP eCLIP12.46□□□□□ -0.41
AC009411.1-202ENST00000412424 PHF12Q96QT6 1004 aa12.46□□□□□ -0.41
AC009411.1-202ENST00000412424 PROM2Q8N271 834 aa12.44□□□□□ -0.42
AC009411.1-202ENST00000412424 PELP1Q8IZL8 1130 aaKnown RBP12.28□□□□□ -0.44
AC009411.1-202ENST00000412424 POTEB2H3BUK9 544 aa12.27□□□□□ -0.45
AC009411.1-202ENST00000412424 MS4A3Q96HJ5 214 aa12.27□□□□□ -0.45
AC009411.1-202ENST00000412424 TSPYL2Q9H2G4 693 aaPredicted RBP12.26□□□□□ -0.45
AC009411.1-202ENST00000412424 OTUD5Q96G74 571 aa12.24□□□□□ -0.45
AC009411.1-202ENST00000412424 ASTLQ6HA08 431 aaPredicted RBP12.21□□□□□ -0.45
AC009411.1-202ENST00000412424 CCDC61Q9Y6R9 512 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms