RNA–Protein interactions for RNA: ENST00000457435.1

LINC01546-201, Transcript of long intergenic non-protein coding RNA 1546, humanhuman

TSL 2 BASIC

Gene LINC01546, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546-201ENST00000457435 AEBP2Q6ZN18 517 aaPredicted RBP24.66■■□□□ 1.54
LINC01546-201ENST00000457435 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
LINC01546-201ENST00000457435 SENP3Q9H4L4 574 aaPredicted RBP21.07■□□□□ 0.96
LINC01546-201ENST00000457435 PHF23Q9BUL5 403 aaPredicted RBP20.82■□□□□ 0.92
LINC01546-201ENST00000457435 FOXD1Q16676 465 aa19.63■□□□□ 0.73
LINC01546-201ENST00000457435 PLPPR3Q6T4P5 718 aa18.71■□□□□ 0.59
LINC01546-201ENST00000457435 MSH5O43196 834 aa18.4■□□□□ 0.54
LINC01546-201ENST00000457435 PIAS4Q8N2W9 510 aaPredicted RBP18.38■□□□□ 0.53
LINC01546-201ENST00000457435 PPP6R1Q9UPN7 881 aa18.34■□□□□ 0.53
LINC01546-201ENST00000457435 ADRA2BP18089 450 aa18.32■□□□□ 0.52
LINC01546-201ENST00000457435 POTEDQ86YR6 584 aa17.99■□□□□ 0.47
LINC01546-201ENST00000457435 MAPK8IP2Q13387 824 aaPredicted RBP16.84■□□□□ 0.29
LINC01546-201ENST00000457435 SCAF1Q9H7N4 1312 aaKnown RBP16.78■□□□□ 0.28
LINC01546-201ENST00000457435 DMRT2Q9Y5R5 561 aa16.68■□□□□ 0.26
LINC01546-201ENST00000457435 PPP4R3CPQ6ZMV5 832 aa16.42■□□□□ 0.22
LINC01546-201ENST00000457435 DCAF8L1A6NGE4 600 aa16.16■□□□□ 0.18
LINC01546-201ENST00000457435 CNKSR2Q8WXI2 1034 aa16.1■□□□□ 0.17
LINC01546-201ENST00000457435 HOXD11P31277 338 aaPredicted RBP16.03■□□□□ 0.16
LINC01546-201ENST00000457435 RNF216Q9NWF9 866 aaPredicted RBP15.94■□□□□ 0.14
LINC01546-201ENST00000457435 CACNB1Q02641 598 aaPredicted RBP15.88■□□□□ 0.13
LINC01546-201ENST00000457435 NCBP3Q53F19 620 aaKnown RBP15.81■□□□□ 0.12
LINC01546-201ENST00000457435 RNF39Q9H2S5 420 aa15.66■□□□□ 0.1
LINC01546-201ENST00000457435 NPM3O75607 178 aaKnown RBP15.52■□□□□ 0.08
LINC01546-201ENST00000457435 C1QBPQ07021 282 aaKnown RBP15.46■□□□□ 0.07
LINC01546-201ENST00000457435 DNAJC5BQ9UF47 199 aa15.44■□□□□ 0.06
LINC01546-201ENST00000457435 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.41■□□□□ 0.06
LINC01546-201ENST00000457435 KCNA4P22459 653 aa15.22■□□□□ 0.03
LINC01546-201ENST00000457435 U3KPZ7 1027 aaPredicted RBP14.98□□□□□ -0.01
LINC01546-201ENST00000457435 CAPN15O75808 1086 aa14.85□□□□□ -0.03
LINC01546-201ENST00000457435 SLC4A2P04920 1241 aa14.81□□□□□ -0.04
LINC01546-201ENST00000457435 SPINK5Q9NQ38 1064 aaPredicted RBP14.81□□□□□ -0.04
LINC01546-201ENST00000457435 DSG3P32926 999 aa14.67□□□□□ -0.06
LINC01546-201ENST00000457435 APLP2Q06481 763 aa14.63□□□□□ -0.07
LINC01546-201ENST00000457435 TRHP20396 242 aaPredicted RBP14.61□□□□□ -0.07
LINC01546-201ENST00000457435 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.59□□□□□ -0.07
LINC01546-201ENST00000457435 HNRNPUL2Q1KMD3 747 aaKnown RBP14.59□□□□□ -0.07
LINC01546-201ENST00000457435 ZNF219Q9P2Y4 722 aaPredicted RBP14.52□□□□□ -0.09
LINC01546-201ENST00000457435 SAMD1Q6SPF0 538 aaPredicted RBP14.51□□□□□ -0.09
LINC01546-201ENST00000457435 ABCB7O75027 752 aa14.5□□□□□ -0.09
LINC01546-201ENST00000457435 SLC4A1APQ9BWU0 796 aaKnown RBP14.4□□□□□ -0.1
LINC01546-201ENST00000457435 MYCNP04198 464 aaPredicted RBP14.37□□□□□ -0.11
LINC01546-201ENST00000457435 FOXD4L1Q9NU39 408 aa14.21□□□□□ -0.13
LINC01546-201ENST00000457435 POLA2Q14181 598 aa14.18□□□□□ -0.14
LINC01546-201ENST00000457435 POTEHQ6S545 545 aa14.12□□□□□ -0.15
LINC01546-201ENST00000457435 RBM42Q9BTD8 480 aaKnown RBP14.04□□□□□ -0.16
LINC01546-201ENST00000457435 ATF5Q9Y2D1 282 aaPredicted RBP14.03□□□□□ -0.16
LINC01546-201ENST00000457435 ZBTB22O15209 634 aa13.97□□□□□ -0.17
LINC01546-201ENST00000457435 ZBTB12Q9Y330 459 aaPredicted RBP13.86□□□□□ -0.19
LINC01546-201ENST00000457435 ATXN8OSP0DMR3 200 aa13.75□□□□□ -0.21
LINC01546-201ENST00000457435 CHRDL2Q6WN34 429 aa13.74□□□□□ -0.21
LINC01546-201ENST00000457435 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
LINC01546-201ENST00000457435 AKT1S1Q96B36 256 aa13.7□□□□□ -0.22
LINC01546-201ENST00000457435 REM2Q8IYK8 340 aaPredicted RBP13.58□□□□□ -0.24
LINC01546-201ENST00000457435 FBLN2P98095 1184 aa13.56□□□□□ -0.24
LINC01546-201ENST00000457435 SPDYE2BA6NHP3 402 aa13.42□□□□□ -0.26
LINC01546-201ENST00000457435 PITPNM1O00562 1244 aa13.42□□□□□ -0.26
LINC01546-201ENST00000457435 SPDYE6P0CI01 402 aa13.42□□□□□ -0.26
LINC01546-201ENST00000457435 SPDYE2Q495Y8 402 aa13.42□□□□□ -0.26
LINC01546-201ENST00000457435 PIP4P2Q8N4L2 257 aa13.4□□□□□ -0.26
LINC01546-201ENST00000457435 MKRN4PQ13434 485 aaPredicted RBP13.36□□□□□ -0.27
LINC01546-201ENST00000457435 CSRNP3Q8WYN3 585 aa13.32□□□□□ -0.28
LINC01546-201ENST00000457435 ZNF692Q9BU19 519 aaPredicted RBP13.32□□□□□ -0.28
LINC01546-201ENST00000457435 FXR2P51116 673 aaKnown RBP eCLIP13.29□□□□□ -0.28
LINC01546-201ENST00000457435 CLEC11AQ9Y240 323 aa13.26□□□□□ -0.29
LINC01546-201ENST00000457435 HAX1O00165 279 aa13.24□□□□□ -0.29
LINC01546-201ENST00000457435 SPDYE1Q8NFV5 336 aaPredicted RBP13.22□□□□□ -0.29
LINC01546-201ENST00000457435 EHMT2Q96KQ7 1210 aa13.22□□□□□ -0.29
LINC01546-201ENST00000457435 SP7Q8TDD2 431 aaPredicted RBP13.21□□□□□ -0.29
LINC01546-201ENST00000457435 SSUH2Q9Y2M2 353 aa13.19□□□□□ -0.3
LINC01546-201ENST00000457435 PRKAR2AP13861 404 aaKnown RBP13.11□□□□□ -0.31
LINC01546-201ENST00000457435 PABPN1Q86U42 306 aaKnown RBP eCLIP13.1□□□□□ -0.31
LINC01546-201ENST00000457435 PRR29P0C7W0 189 aa13.02□□□□□ -0.33
LINC01546-201ENST00000457435 EVX2Q03828 476 aa12.99□□□□□ -0.33
LINC01546-201ENST00000457435 CHADLQ6NUI6 762 aa12.97□□□□□ -0.33
LINC01546-201ENST00000457435 C19orf67A6NJJ6 358 aa12.86□□□□□ -0.35
LINC01546-201ENST00000457435 SPDYE4A6NLX3 237 aa12.79□□□□□ -0.36
LINC01546-201ENST00000457435 FARP1Q9Y4F1 1045 aaPredicted RBP12.75□□□□□ -0.37
LINC01546-201ENST00000457435 STAG3Q9UJ98 1225 aa12.73□□□□□ -0.37
LINC01546-201ENST00000457435 GABBR2O75899 941 aa12.72□□□□□ -0.37
LINC01546-201ENST00000457435 CD44P16070 742 aaKnown RBP12.69□□□□□ -0.38
LINC01546-201ENST00000457435 CREBZFQ9NS37 354 aa12.62□□□□□ -0.39
LINC01546-201ENST00000457435 ZRANB1Q9UGI0 708 aa12.54□□□□□ -0.4
LINC01546-201ENST00000457435 CLCN6P51797 869 aa12.47□□□□□ -0.41
LINC01546-201ENST00000457435 NPM1P06748 294 aaKnown RBP eCLIP12.45□□□□□ -0.42
LINC01546-201ENST00000457435 PAK3O75914 559 aaPredicted RBP12.44□□□□□ -0.42
LINC01546-201ENST00000457435 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
LINC01546-201ENST00000457435 DCBLD2Q96PD2 775 aa12.44□□□□□ -0.42
LINC01546-201ENST00000457435 LHX8Q68G74 356 aa12.43□□□□□ -0.42
LINC01546-201ENST00000457435 POTEIP0CG38 1075 aa12.4□□□□□ -0.42
LINC01546-201ENST00000457435 PROM2Q8N271 834 aa12.37□□□□□ -0.43
LINC01546-201ENST00000457435 MNX1P50219 401 aaPredicted RBP12.35□□□□□ -0.43
LINC01546-201ENST00000457435 PHF12Q96QT6 1004 aa12.34□□□□□ -0.43
LINC01546-201ENST00000457435 GALR2O43603 387 aaPredicted RBP12.32□□□□□ -0.44
LINC01546-201ENST00000457435 MIER1Q8N108 512 aa12.27□□□□□ -0.45
LINC01546-201ENST00000457435 PLEKHG5O94827 1062 aa12.26□□□□□ -0.45
LINC01546-201ENST00000457435 TSPYL2Q9H2G4 693 aaPredicted RBP12.25□□□□□ -0.45
LINC01546-201ENST00000457435 PLCD3Q8N3E9 789 aa12.16□□□□□ -0.46
LINC01546-201ENST00000457435 MS4A3Q96HJ5 214 aa12.15□□□□□ -0.46
LINC01546-201ENST00000457435 FKBP8Q14318 412 aa12.14□□□□□ -0.47
LINC01546-201ENST00000457435 PELP1Q8IZL8 1130 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms