RNA–Protein interactions for RNA: ENST00000599756.1

AC008946.1-201, humanhuman

TSL 3 BASIC

Gene AC008946.1, Length 421 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008946.1-201ENST00000599756 AEBP2Q6ZN18 517 aaPredicted RBP24.76■■□□□ 1.55
AC008946.1-201ENST00000599756 CHIC1Q5VXU3 224 aa23.53■■□□□ 1.36
AC008946.1-201ENST00000599756 SENP3Q9H4L4 574 aaPredicted RBP21.05■□□□□ 0.96
AC008946.1-201ENST00000599756 PHF23Q9BUL5 403 aaPredicted RBP20.8■□□□□ 0.92
AC008946.1-201ENST00000599756 FOXD1Q16676 465 aa19.65■□□□□ 0.74
AC008946.1-201ENST00000599756 PLPPR3Q6T4P5 718 aa18.79■□□□□ 0.6
AC008946.1-201ENST00000599756 PPP6R1Q9UPN7 881 aa18.43■□□□□ 0.54
AC008946.1-201ENST00000599756 ADRA2BP18089 450 aa18.34■□□□□ 0.53
AC008946.1-201ENST00000599756 MSH5O43196 834 aa18.33■□□□□ 0.52
AC008946.1-201ENST00000599756 PIAS4Q8N2W9 510 aaPredicted RBP18.32■□□□□ 0.52
AC008946.1-201ENST00000599756 POTEDQ86YR6 584 aa17.84■□□□□ 0.45
AC008946.1-201ENST00000599756 MAPK8IP2Q13387 824 aaPredicted RBP16.84■□□□□ 0.29
AC008946.1-201ENST00000599756 DMRT2Q9Y5R5 561 aa16.74■□□□□ 0.27
AC008946.1-201ENST00000599756 SCAF1Q9H7N4 1312 aaKnown RBP16.72■□□□□ 0.27
AC008946.1-201ENST00000599756 PPP4R3CPQ6ZMV5 832 aa16.48■□□□□ 0.23
AC008946.1-201ENST00000599756 CNKSR2Q8WXI2 1034 aa16.16■□□□□ 0.18
AC008946.1-201ENST00000599756 HOXD11P31277 338 aaPredicted RBP16.15■□□□□ 0.18
AC008946.1-201ENST00000599756 RNF216Q9NWF9 866 aaPredicted RBP16.02■□□□□ 0.16
AC008946.1-201ENST00000599756 DCAF8L1A6NGE4 600 aa15.92■□□□□ 0.14
AC008946.1-201ENST00000599756 NCBP3Q53F19 620 aaKnown RBP15.81■□□□□ 0.12
AC008946.1-201ENST00000599756 RNF39Q9H2S5 420 aa15.68■□□□□ 0.1
AC008946.1-201ENST00000599756 CACNB1Q02641 598 aaPredicted RBP15.66■□□□□ 0.1
AC008946.1-201ENST00000599756 NPM3O75607 178 aaKnown RBP15.65■□□□□ 0.1
AC008946.1-201ENST00000599756 DNAJC5BQ9UF47 199 aa15.61■□□□□ 0.09
AC008946.1-201ENST00000599756 C1QBPQ07021 282 aaKnown RBP15.43■□□□□ 0.06
AC008946.1-201ENST00000599756 KCNA4P22459 653 aa15.38■□□□□ 0.05
AC008946.1-201ENST00000599756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.29■□□□□ 0.04
AC008946.1-201ENST00000599756 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
AC008946.1-201ENST00000599756 SLC4A2P04920 1241 aa14.96□□□□□ -0.01
AC008946.1-201ENST00000599756 SPINK5Q9NQ38 1064 aaPredicted RBP14.81□□□□□ -0.04
AC008946.1-201ENST00000599756 CAPN15O75808 1086 aa14.71□□□□□ -0.05
AC008946.1-201ENST00000599756 DSG3P32926 999 aa14.7□□□□□ -0.06
AC008946.1-201ENST00000599756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.58□□□□□ -0.08
AC008946.1-201ENST00000599756 HNRNPUL2Q1KMD3 747 aaKnown RBP14.58□□□□□ -0.08
AC008946.1-201ENST00000599756 APLP2Q06481 763 aa14.56□□□□□ -0.08
AC008946.1-201ENST00000599756 SAMD1Q6SPF0 538 aaPredicted RBP14.51□□□□□ -0.09
AC008946.1-201ENST00000599756 TRHP20396 242 aaPredicted RBP14.49□□□□□ -0.09
AC008946.1-201ENST00000599756 SLC4A1APQ9BWU0 796 aaKnown RBP14.49□□□□□ -0.09
AC008946.1-201ENST00000599756 ZNF219Q9P2Y4 722 aaPredicted RBP14.48□□□□□ -0.09
AC008946.1-201ENST00000599756 MYCNP04198 464 aaPredicted RBP14.44□□□□□ -0.1
AC008946.1-201ENST00000599756 ABCB7O75027 752 aa14.39□□□□□ -0.11
AC008946.1-201ENST00000599756 FOXD4L1Q9NU39 408 aa14.32□□□□□ -0.12
AC008946.1-201ENST00000599756 ZBTB22O15209 634 aa14.17□□□□□ -0.14
AC008946.1-201ENST00000599756 POLA2Q14181 598 aa14.15□□□□□ -0.14
AC008946.1-201ENST00000599756 ATF5Q9Y2D1 282 aaPredicted RBP14.15□□□□□ -0.14
AC008946.1-201ENST00000599756 POTEHQ6S545 545 aa13.97□□□□□ -0.17
AC008946.1-201ENST00000599756 RBM42Q9BTD8 480 aaKnown RBP13.97□□□□□ -0.17
AC008946.1-201ENST00000599756 ATXN8OSP0DMR3 200 aa13.9□□□□□ -0.18
AC008946.1-201ENST00000599756 ZBTB12Q9Y330 459 aaPredicted RBP13.84□□□□□ -0.19
AC008946.1-201ENST00000599756 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
AC008946.1-201ENST00000599756 AKT1S1Q96B36 256 aa13.69□□□□□ -0.22
AC008946.1-201ENST00000599756 CHRDL2Q6WN34 429 aa13.66□□□□□ -0.22
AC008946.1-201ENST00000599756 REM2Q8IYK8 340 aaPredicted RBP13.57□□□□□ -0.24
AC008946.1-201ENST00000599756 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
AC008946.1-201ENST00000599756 FBLN2P98095 1184 aa13.51□□□□□ -0.25
AC008946.1-201ENST00000599756 MKRN4PQ13434 485 aaPredicted RBP13.51□□□□□ -0.25
AC008946.1-201ENST00000599756 SPDYE2BA6NHP3 402 aa13.45□□□□□ -0.26
AC008946.1-201ENST00000599756 SPDYE6P0CI01 402 aa13.45□□□□□ -0.26
AC008946.1-201ENST00000599756 SPDYE2Q495Y8 402 aa13.45□□□□□ -0.26
AC008946.1-201ENST00000599756 PITPNM1O00562 1244 aa13.42□□□□□ -0.26
AC008946.1-201ENST00000599756 PIP4P2Q8N4L2 257 aa13.36□□□□□ -0.27
AC008946.1-201ENST00000599756 FXR2P51116 673 aaKnown RBP eCLIP13.33□□□□□ -0.28
AC008946.1-201ENST00000599756 SSUH2Q9Y2M2 353 aa13.31□□□□□ -0.28
AC008946.1-201ENST00000599756 EHMT2Q96KQ7 1210 aa13.3□□□□□ -0.28
AC008946.1-201ENST00000599756 ZNF692Q9BU19 519 aaPredicted RBP13.27□□□□□ -0.29
AC008946.1-201ENST00000599756 SPDYE1Q8NFV5 336 aaPredicted RBP13.19□□□□□ -0.3
AC008946.1-201ENST00000599756 SP7Q8TDD2 431 aaPredicted RBP13.12□□□□□ -0.31
AC008946.1-201ENST00000599756 CLEC11AQ9Y240 323 aa13.12□□□□□ -0.31
AC008946.1-201ENST00000599756 PABPN1Q86U42 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
AC008946.1-201ENST00000599756 HAX1O00165 279 aa13.05□□□□□ -0.32
AC008946.1-201ENST00000599756 PRKAR2AP13861 404 aaKnown RBP13.05□□□□□ -0.32
AC008946.1-201ENST00000599756 EVX2Q03828 476 aa12.99□□□□□ -0.33
AC008946.1-201ENST00000599756 PRR29P0C7W0 189 aa12.93□□□□□ -0.34
AC008946.1-201ENST00000599756 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
AC008946.1-201ENST00000599756 C19orf67A6NJJ6 358 aa12.89□□□□□ -0.35
AC008946.1-201ENST00000599756 SPDYE4A6NLX3 237 aa12.83□□□□□ -0.36
AC008946.1-201ENST00000599756 FARP1Q9Y4F1 1045 aaPredicted RBP12.74□□□□□ -0.37
AC008946.1-201ENST00000599756 STAG3Q9UJ98 1225 aa12.73□□□□□ -0.37
AC008946.1-201ENST00000599756 CREBZFQ9NS37 354 aa12.68□□□□□ -0.38
AC008946.1-201ENST00000599756 GABBR2O75899 941 aa12.66□□□□□ -0.38
AC008946.1-201ENST00000599756 CD44P16070 742 aaKnown RBP12.62□□□□□ -0.39
AC008946.1-201ENST00000599756 PROM2Q8N271 834 aa12.62□□□□□ -0.39
AC008946.1-201ENST00000599756 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
AC008946.1-201ENST00000599756 CLCN6P51797 869 aa12.48□□□□□ -0.41
AC008946.1-201ENST00000599756 ZNF579Q8NAF0 562 aaKnown RBP12.47□□□□□ -0.41
AC008946.1-201ENST00000599756 ZRANB1Q9UGI0 708 aa12.45□□□□□ -0.42
AC008946.1-201ENST00000599756 POTEIP0CG38 1075 aa12.44□□□□□ -0.42
AC008946.1-201ENST00000599756 NPM1P06748 294 aaKnown RBP eCLIP12.39□□□□□ -0.43
AC008946.1-201ENST00000599756 GALR2O43603 387 aaPredicted RBP12.31□□□□□ -0.44
AC008946.1-201ENST00000599756 PAK3O75914 559 aaPredicted RBP12.31□□□□□ -0.44
AC008946.1-201ENST00000599756 LHX8Q68G74 356 aa12.3□□□□□ -0.44
AC008946.1-201ENST00000599756 PHF12Q96QT6 1004 aa12.3□□□□□ -0.44
AC008946.1-201ENST00000599756 DCBLD2Q96PD2 775 aa12.27□□□□□ -0.45
AC008946.1-201ENST00000599756 FKBP8Q14318 412 aa12.23□□□□□ -0.45
AC008946.1-201ENST00000599756 MIER1Q8N108 512 aa12.21□□□□□ -0.45
AC008946.1-201ENST00000599756 CCDC61Q9Y6R9 512 aa12.18□□□□□ -0.46
AC008946.1-201ENST00000599756 TSPYL2Q9H2G4 693 aaPredicted RBP12.17□□□□□ -0.46
AC008946.1-201ENST00000599756 PLEKHG5O94827 1062 aa12.15□□□□□ -0.46
AC008946.1-201ENST00000599756 MS4A3Q96HJ5 214 aa12.15□□□□□ -0.46
AC008946.1-201ENST00000599756 RASEFQ8IZ41 740 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms