RNA–Protein interactions for RNA: ENST00000609858.1

AC004948.1-201, humanhuman

BASIC

Gene AC004948.1, Length 672 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004948.1-201ENST00000609858 AEBP2Q6ZN18 517 aaPredicted RBP24.76■■□□□ 1.55
AC004948.1-201ENST00000609858 CHIC1Q5VXU3 224 aa23.48■■□□□ 1.35
AC004948.1-201ENST00000609858 SENP3Q9H4L4 574 aaPredicted RBP21.21■□□□□ 0.99
AC004948.1-201ENST00000609858 PHF23Q9BUL5 403 aaPredicted RBP20.89■□□□□ 0.93
AC004948.1-201ENST00000609858 FOXD1Q16676 465 aa19.73■□□□□ 0.75
AC004948.1-201ENST00000609858 POTEDQ86YR6 584 aa18.87■□□□□ 0.61
AC004948.1-201ENST00000609858 PLPPR3Q6T4P5 718 aa18.77■□□□□ 0.6
AC004948.1-201ENST00000609858 MSH5O43196 834 aa18.53■□□□□ 0.56
AC004948.1-201ENST00000609858 PIAS4Q8N2W9 510 aaPredicted RBP18.51■□□□□ 0.55
AC004948.1-201ENST00000609858 ADRA2BP18089 450 aa18.37■□□□□ 0.53
AC004948.1-201ENST00000609858 PPP6R1Q9UPN7 881 aa18.37■□□□□ 0.53
AC004948.1-201ENST00000609858 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
AC004948.1-201ENST00000609858 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
AC004948.1-201ENST00000609858 DMRT2Q9Y5R5 561 aa16.77■□□□□ 0.28
AC004948.1-201ENST00000609858 PPP4R3CPQ6ZMV5 832 aa16.44■□□□□ 0.22
AC004948.1-201ENST00000609858 DCAF8L1A6NGE4 600 aa16.25■□□□□ 0.19
AC004948.1-201ENST00000609858 CNKSR2Q8WXI2 1034 aa16.14■□□□□ 0.17
AC004948.1-201ENST00000609858 HOXD11P31277 338 aaPredicted RBP16.09■□□□□ 0.17
AC004948.1-201ENST00000609858 CACNB1Q02641 598 aaPredicted RBP16.01■□□□□ 0.15
AC004948.1-201ENST00000609858 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
AC004948.1-201ENST00000609858 NCBP3Q53F19 620 aaKnown RBP15.83■□□□□ 0.12
AC004948.1-201ENST00000609858 RNF39Q9H2S5 420 aa15.77■□□□□ 0.12
AC004948.1-201ENST00000609858 NPM3O75607 178 aaKnown RBP15.55■□□□□ 0.08
AC004948.1-201ENST00000609858 C1QBPQ07021 282 aaKnown RBP15.55■□□□□ 0.08
AC004948.1-201ENST00000609858 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
AC004948.1-201ENST00000609858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.47■□□□□ 0.07
AC004948.1-201ENST00000609858 KCNA4P22459 653 aa15.22■□□□□ 0.03
AC004948.1-201ENST00000609858 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
AC004948.1-201ENST00000609858 CAPN15O75808 1086 aa14.93□□□□□ -0.02
AC004948.1-201ENST00000609858 SPINK5Q9NQ38 1064 aaPredicted RBP14.88□□□□□ -0.03
AC004948.1-201ENST00000609858 SLC4A2P04920 1241 aa14.83□□□□□ -0.04
AC004948.1-201ENST00000609858 DSG3P32926 999 aa14.75□□□□□ -0.05
AC004948.1-201ENST00000609858 APLP2Q06481 763 aa14.71□□□□□ -0.05
AC004948.1-201ENST00000609858 TRHP20396 242 aaPredicted RBP14.68□□□□□ -0.06
AC004948.1-201ENST00000609858 POTEHQ6S545 545 aa14.67□□□□□ -0.06
AC004948.1-201ENST00000609858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.65□□□□□ -0.06
AC004948.1-201ENST00000609858 HNRNPUL2Q1KMD3 747 aaKnown RBP14.65□□□□□ -0.06
AC004948.1-201ENST00000609858 ZNF219Q9P2Y4 722 aaPredicted RBP14.61□□□□□ -0.07
AC004948.1-201ENST00000609858 ABCB7O75027 752 aa14.58□□□□□ -0.08
AC004948.1-201ENST00000609858 SAMD1Q6SPF0 538 aaPredicted RBP14.56□□□□□ -0.08
AC004948.1-201ENST00000609858 MYCNP04198 464 aaPredicted RBP14.43□□□□□ -0.1
AC004948.1-201ENST00000609858 SLC4A1APQ9BWU0 796 aaKnown RBP14.39□□□□□ -0.11
AC004948.1-201ENST00000609858 FOXD4L1Q9NU39 408 aa14.23□□□□□ -0.13
AC004948.1-201ENST00000609858 POLA2Q14181 598 aa14.21□□□□□ -0.13
AC004948.1-201ENST00000609858 RBM42Q9BTD8 480 aaKnown RBP14.15□□□□□ -0.14
AC004948.1-201ENST00000609858 NISCHQ9Y2I1 1504 aa14.15□□□□□ -0.14
AC004948.1-201ENST00000609858 ABCC9O60706 1549 aa14.06□□□□□ -0.16
AC004948.1-201ENST00000609858 ATF5Q9Y2D1 282 aaPredicted RBP14.04□□□□□ -0.16
AC004948.1-201ENST00000609858 ZBTB22O15209 634 aa13.95□□□□□ -0.18
AC004948.1-201ENST00000609858 ZBTB12Q9Y330 459 aaPredicted RBP13.94□□□□□ -0.18
AC004948.1-201ENST00000609858 EHMT2Q96KQ7 1210 aa13.89□□□□□ -0.19
AC004948.1-201ENST00000609858 CHRDL2Q6WN34 429 aa13.84□□□□□ -0.19
AC004948.1-201ENST00000609858 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
AC004948.1-201ENST00000609858 AKT1S1Q96B36 256 aa13.76□□□□□ -0.21
AC004948.1-201ENST00000609858 ATXN8OSP0DMR3 200 aa13.75□□□□□ -0.21
AC004948.1-201ENST00000609858 CSRNP3Q8WYN3 585 aa13.71□□□□□ -0.21
AC004948.1-201ENST00000609858 REM2Q8IYK8 340 aaPredicted RBP13.64□□□□□ -0.23
AC004948.1-201ENST00000609858 FBLN2P98095 1184 aa13.6□□□□□ -0.23
AC004948.1-201ENST00000609858 PITPNM1O00562 1244 aa13.51□□□□□ -0.25
AC004948.1-201ENST00000609858 PIP4P2Q8N4L2 257 aa13.49□□□□□ -0.25
AC004948.1-201ENST00000609858 SPDYE2BA6NHP3 402 aa13.48□□□□□ -0.25
AC004948.1-201ENST00000609858 SPDYE6P0CI01 402 aa13.48□□□□□ -0.25
AC004948.1-201ENST00000609858 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
AC004948.1-201ENST00000609858 DNAJC5Q9H3Z4 198 aa13.45□□□□□ -0.26
AC004948.1-201ENST00000609858 SP7Q8TDD2 431 aaPredicted RBP13.42□□□□□ -0.26
AC004948.1-201ENST00000609858 MKRN4PQ13434 485 aaPredicted RBP13.38□□□□□ -0.27
AC004948.1-201ENST00000609858 FXR2P51116 673 aaKnown RBP eCLIP13.34□□□□□ -0.27
AC004948.1-201ENST00000609858 ZNF692Q9BU19 519 aaPredicted RBP13.33□□□□□ -0.28
AC004948.1-201ENST00000609858 HAX1O00165 279 aa13.32□□□□□ -0.28
AC004948.1-201ENST00000609858 CLEC11AQ9Y240 323 aa13.32□□□□□ -0.28
AC004948.1-201ENST00000609858 SPDYE1Q8NFV5 336 aaPredicted RBP13.28□□□□□ -0.28
AC004948.1-201ENST00000609858 SSUH2Q9Y2M2 353 aa13.24□□□□□ -0.29
AC004948.1-201ENST00000609858 PRKAR2AP13861 404 aaKnown RBP13.19□□□□□ -0.3
AC004948.1-201ENST00000609858 PABPN1Q86U42 306 aaKnown RBP eCLIP13.14□□□□□ -0.31
AC004948.1-201ENST00000609858 CCDC180Q9P1Z9 1646 aa13.13□□□□□ -0.31
AC004948.1-201ENST00000609858 PRR29P0C7W0 189 aa13.05□□□□□ -0.32
AC004948.1-201ENST00000609858 EVX2Q03828 476 aa13.04□□□□□ -0.32
AC004948.1-201ENST00000609858 CHADLQ6NUI6 762 aa13.03□□□□□ -0.32
AC004948.1-201ENST00000609858 C19orf67A6NJJ6 358 aa12.93□□□□□ -0.34
AC004948.1-201ENST00000609858 RB1CC1Q8TDY2 1594 aa12.9□□□□□ -0.34
AC004948.1-201ENST00000609858 UNC13AQ9UPW8 1703 aa12.85□□□□□ -0.35
AC004948.1-201ENST00000609858 SPDYE4A6NLX3 237 aa12.79□□□□□ -0.36
AC004948.1-201ENST00000609858 FARP1Q9Y4F1 1045 aaPredicted RBP12.79□□□□□ -0.36
AC004948.1-201ENST00000609858 GABBR2O75899 941 aa12.78□□□□□ -0.36
AC004948.1-201ENST00000609858 CD44P16070 742 aaKnown RBP12.78□□□□□ -0.36
AC004948.1-201ENST00000609858 STAG3Q9UJ98 1225 aa12.75□□□□□ -0.37
AC004948.1-201ENST00000609858 CECR2Q9BXF3 1484 aa12.71□□□□□ -0.38
AC004948.1-201ENST00000609858 CC2D2AQ9P2K1 1620 aa12.67□□□□□ -0.38
AC004948.1-201ENST00000609858 BICRAQ9NZM4 1560 aa12.66□□□□□ -0.38
AC004948.1-201ENST00000609858 CREBZFQ9NS37 354 aa12.64□□□□□ -0.39
AC004948.1-201ENST00000609858 ZRANB1Q9UGI0 708 aa12.59□□□□□ -0.39
AC004948.1-201ENST00000609858 LHX8Q68G74 356 aa12.58□□□□□ -0.4
AC004948.1-201ENST00000609858 TRIM41Q8WV44 630 aa12.56□□□□□ -0.4
AC004948.1-201ENST00000609858 NACADO15069 1562 aa12.56□□□□□ -0.4
AC004948.1-201ENST00000609858 CLCN6P51797 869 aa12.53□□□□□ -0.4
AC004948.1-201ENST00000609858 PAK3O75914 559 aaPredicted RBP12.52□□□□□ -0.41
AC004948.1-201ENST00000609858 ZNF579Q8NAF0 562 aaKnown RBP12.52□□□□□ -0.41
AC004948.1-201ENST00000609858 DCBLD2Q96PD2 775 aa12.51□□□□□ -0.41
AC004948.1-201ENST00000609858 NPM1P06748 294 aaKnown RBP eCLIP12.48□□□□□ -0.41
AC004948.1-201ENST00000609858 POTEIP0CG38 1075 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms