Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 AC011455.2-201ENST00000599320 3336 ntBASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 RNA5SP346-201ENST00000363541 121 ntBASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 RN7SKP187-201ENST00000365536 330 ntBASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 RN7SKP269-201ENST00000365545 319 ntBASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 IFIT1P1-201ENST00000400497 1449 ntBASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 AL049697.3-201ENST00000406493 982 ntBASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 RN7SKP121-201ENST00000410842 305 ntBASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 OR13C1P-201ENST00000457612 963 ntBASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 CLCA3P-203ENST00000490028 2781 ntBASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 AC008055.1-201ENST00000547032 609 ntBASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 AC092375.1-201ENST00000550410 637 ntBASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 AC134669.1-201ENST00000581275 672 ntBASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 AP005136.2-201ENST00000583253 1049 ntBASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 AP001962.1-201ENST00000624114 559 ntBASIC7.75□□□□□ -1.17
CDK5RAP2Q96SN8 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 TEX14-201ENST00000240361 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 AL354854.1-201ENST00000455940 1363 ntBASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 MAPK10-323ENST00000641493 3207 ntBASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 TMCC1P1-201ENST00000518897 1980 ntBASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 AC011379.1-201ENST00000508713 3025 ntBASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 RNU1-65P-201ENST00000363919 148 ntBASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 RN7SKP281-201ENST00000410472 352 ntBASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 AL663061.1-201ENST00000416625 580 ntBASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 AC108479.1-201ENST00000431142 427 ntBASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 RPL12P11-201ENST00000439970 501 ntBASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 EEF1B2P3-201ENST00000447718 678 ntBASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 RPL12P24-201ENST00000474907 486 ntBASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 HSD3BP3-201ENST00000514706 994 ntBASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 MIR3154-201ENST00000577829 84 ntBASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 AL078623.1-201ENST00000602702 907 ntBASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 AC073593.1-201ENST00000624500 411 ntBASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CDK5RAP2Q96SN8 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
CDK5RAP2Q96SN8 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC7.73□□□□□ -1.17
CDK5RAP2Q96SN8 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP2Q96SN8 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP2Q96SN8 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
CDK5RAP2Q96SN8 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP2Q96SN8 USP48-203ENST00000374732 3037 ntTSL 2 BASIC7.73□□□□□ -1.17
CDK5RAP2Q96SN8 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CDK5RAP2Q96SN8 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.73□□□□□ -1.17
CDK5RAP2Q96SN8 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms