RNA–Protein interactions for RNA: ENST00000517373.1

EBF1-203, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 2,277 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-203ENST00000517373 CHIC1Q5VXU3 224 aa14.75□□□□□ -0.05
EBF1-203ENST00000517373 AEBP2Q6ZN18 517 aaPredicted RBP14.65□□□□□ -0.06
EBF1-203ENST00000517373 NISCHQ9Y2I1 1504 aa14.1□□□□□ -0.15
EBF1-203ENST00000517373 PELP1Q8IZL8 1130 aaKnown RBP14.06□□□□□ -0.16
EBF1-203ENST00000517373 MYT1Q01538 1121 aa13.88□□□□□ -0.19
EBF1-203ENST00000517373 TTBK1Q5TCY1 1321 aaPredicted RBP13.38□□□□□ -0.27
EBF1-203ENST00000517373 HRCP23327 699 aa13.03□□□□□ -0.32
EBF1-203ENST00000517373 SLC24A1O60721 1099 aa12.98□□□□□ -0.33
EBF1-203ENST00000517373 PHF23Q9BUL5 403 aaPredicted RBP12.98□□□□□ -0.33
EBF1-203ENST00000517373 SCAF1Q9H7N4 1312 aaKnown RBP12.64□□□□□ -0.39
EBF1-203ENST00000517373 PRKCSHP14314 528 aaPredicted RBP12.62□□□□□ -0.39
EBF1-203ENST00000517373 ERICH6Q7L0X2 663 aa12.61□□□□□ -0.39
EBF1-203ENST00000517373 APLP2Q06481 763 aa12.51□□□□□ -0.41
EBF1-203ENST00000517373 BCL11AQ9H165 835 aa12.45□□□□□ -0.42
EBF1-203ENST00000517373 SENP3Q9H4L4 574 aaPredicted RBP12.42□□□□□ -0.42
EBF1-203ENST00000517373 PPARGC1BQ86YN6 1023 aaKnown RBP12.37□□□□□ -0.43
EBF1-203ENST00000517373 CCDC180Q9P1Z9 1646 aa12.33□□□□□ -0.44
EBF1-203ENST00000517373 CENPBP07199 599 aaPredicted RBP12.3□□□□□ -0.44
EBF1-203ENST00000517373 FAM9AQ8IZU1 332 aaPredicted RBP12.24□□□□□ -0.45
EBF1-203ENST00000517373 ACIN1Q9UKV3 1341 aaKnown RBP12.19□□□□□ -0.46
EBF1-203ENST00000517373 PLPPR3Q6T4P5 718 aa12.17□□□□□ -0.46
EBF1-203ENST00000517373 ZEB1P37275 1124 aaPredicted RBP12.15□□□□□ -0.46
EBF1-203ENST00000517373 PCGF6Q9BYE7 350 aa12.13□□□□□ -0.47
EBF1-203ENST00000517373 GTF3C3Q9Y5Q9 886 aa12.01□□□□□ -0.49
EBF1-203ENST00000517373 ANP32EQ9BTT0 268 aa11.99□□□□□ -0.49
EBF1-203ENST00000517373 ABCC9O60706 1549 aa11.99□□□□□ -0.49
EBF1-203ENST00000517373 DCAF8L2P0C7V8 631 aa11.98□□□□□ -0.49
EBF1-203ENST00000517373 NEUROD1Q13562 356 aa11.98□□□□□ -0.49
EBF1-203ENST00000517373 DAXXQ9UER7 740 aaPredicted RBP11.96□□□□□ -0.49
EBF1-203ENST00000517373 DCAF1Q9Y4B6 1507 aa11.95□□□□□ -0.5
EBF1-203ENST00000517373 MYO15BQ96JP2 1530 aa11.91□□□□□ -0.5
EBF1-203ENST00000517373 TRIM26Q12899 539 aaPredicted RBP11.78□□□□□ -0.52
EBF1-203ENST00000517373 ZCCHC6Q5VYS8 1495 aaKnown RBP11.77□□□□□ -0.52
EBF1-203ENST00000517373 CSRNP3Q8WYN3 585 aa11.74□□□□□ -0.53
EBF1-203ENST00000517373 EIF5BO60841 1220 aaKnown RBP11.69□□□□□ -0.54
EBF1-203ENST00000517373 CLSPNQ9HAW4 1339 aa11.67□□□□□ -0.54
EBF1-203ENST00000517373 UBE2Q2Q8WVN8 375 aa11.66□□□□□ -0.54
EBF1-203ENST00000517373 EHMT2Q96KQ7 1210 aa11.65□□□□□ -0.54
EBF1-203ENST00000517373 SHROOM4Q9ULL8 1493 aa11.6□□□□□ -0.55
EBF1-203ENST00000517373 NACADO15069 1562 aa11.54□□□□□ -0.56
EBF1-203ENST00000517373 MYT1LQ9UL68 1186 aa11.53□□□□□ -0.56
EBF1-203ENST00000517373 RB1CC1Q8TDY2 1594 aa11.51□□□□□ -0.57
EBF1-203ENST00000517373 NCBP3Q53F19 620 aaKnown RBP11.51□□□□□ -0.57
EBF1-203ENST00000517373 ERICH6BQ5W0A0 696 aa11.49□□□□□ -0.57
EBF1-203ENST00000517373 DIEXFQ68CQ4 756 aaKnown RBP11.49□□□□□ -0.57
EBF1-203ENST00000517373 RTN4Q9NQC3 1192 aaKnown RBP11.48□□□□□ -0.57
EBF1-203ENST00000517373 TSHZ2Q9NRE2 1034 aa11.48□□□□□ -0.57
EBF1-203ENST00000517373 ANO8Q9HCE9 1232 aaPredicted RBP11.46□□□□□ -0.57
EBF1-203ENST00000517373 FOXD1Q16676 465 aa11.44□□□□□ -0.58
EBF1-203ENST00000517373 PABPN1Q86U42 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
EBF1-203ENST00000517373 SCRIBQ14160 1630 aa11.38□□□□□ -0.59
EBF1-203ENST00000517373 TRIM41Q8WV44 630 aa11.32□□□□□ -0.6
EBF1-203ENST00000517373 ADRA2BP18089 450 aa11.32□□□□□ -0.6
EBF1-203ENST00000517373 SUPT16HQ9Y5B9 1047 aaKnown RBP11.32□□□□□ -0.6
EBF1-203ENST00000517373 PKNOX2Q96KN3 472 aa11.3□□□□□ -0.6
EBF1-203ENST00000517373 PPP6R1Q9UPN7 881 aa11.29□□□□□ -0.6
EBF1-203ENST00000517373 POTEDQ86YR6 584 aa11.26□□□□□ -0.61
EBF1-203ENST00000517373 PODXL2Q9NZ53 605 aa11.25□□□□□ -0.61
EBF1-203ENST00000517373 SALL2Q9Y467 1007 aaPredicted RBP11.25□□□□□ -0.61
EBF1-203ENST00000517373 UNC13AQ9UPW8 1703 aa11.23□□□□□ -0.61
EBF1-203ENST00000517373 PLEKHG5O94827 1062 aa11.21□□□□□ -0.61
EBF1-203ENST00000517373 BICRAQ9NZM4 1560 aa11.18□□□□□ -0.62
EBF1-203ENST00000517373 DEKP35659 375 aaKnown RBP11.16□□□□□ -0.62
EBF1-203ENST00000517373 ZNF316A6NFI3 1004 aaPredicted RBP11.15□□□□□ -0.62
EBF1-203ENST00000517373 YTHDC1Q96MU7 727 aaKnown RBP11.14□□□□□ -0.63
EBF1-203ENST00000517373 ARXQ96QS3 562 aa11.14□□□□□ -0.63
EBF1-203ENST00000517373 FANCIQ9NVI1 1328 aa11.14□□□□□ -0.63
EBF1-203ENST00000517373 RBM19Q9Y4C8 960 aaKnown RBP11.14□□□□□ -0.63
EBF1-203ENST00000517373 SUPT5HO00267 1087 aaKnown RBP11.12□□□□□ -0.63
EBF1-203ENST00000517373 AMER1Q5JTC6 1135 aaPredicted RBP11.1□□□□□ -0.63
EBF1-203ENST00000517373 CECR2Q9BXF3 1484 aa11.09□□□□□ -0.63
EBF1-203ENST00000517373 CCDC136Q96JN2 1154 aa11.09□□□□□ -0.63
EBF1-203ENST00000517373 NEFLP07196 543 aa11.07□□□□□ -0.64
EBF1-203ENST00000517373 MSH5O43196 834 aa11.06□□□□□ -0.64
EBF1-203ENST00000517373 TIMELESSQ9UNS1 1208 aa11.06□□□□□ -0.64
EBF1-203ENST00000517373 LOC105371045A0A1W2PR82 267 aa11.05□□□□□ -0.64
EBF1-203ENST00000517373 MIER1Q8N108 512 aa11.05□□□□□ -0.64
EBF1-203ENST00000517373 CCER1Q8TC90 406 aaPredicted RBP11.05□□□□□ -0.64
EBF1-203ENST00000517373 GLIPR1L2Q4G1C9 344 aa11.01□□□□□ -0.65
EBF1-203ENST00000517373 MROH2BQ7Z745 1585 aa10.95□□□□□ -0.66
EBF1-203ENST00000517373 KCNA4P22459 653 aa10.94□□□□□ -0.66
EBF1-203ENST00000517373 RSF1Q96T23 1441 aaPredicted RBP10.94□□□□□ -0.66
EBF1-203ENST00000517373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.93□□□□□ -0.66
EBF1-203ENST00000517373 RANGAP1P46060 587 aaPredicted RBP10.93□□□□□ -0.66
EBF1-203ENST00000517373 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.92□□□□□ -0.66
EBF1-203ENST00000517373 DNAJC5BQ9UF47 199 aa10.91□□□□□ -0.66
EBF1-203ENST00000517373 PIAS4Q8N2W9 510 aaPredicted RBP10.89□□□□□ -0.67
EBF1-203ENST00000517373 C11orf95C9JLR9 678 aaPredicted RBP10.86□□□□□ -0.67
EBF1-203ENST00000517373 PDE4CQ08493 712 aa10.85□□□□□ -0.67
EBF1-203ENST00000517373 KLHL34Q8N239 644 aa10.85□□□□□ -0.67
EBF1-203ENST00000517373 RSPH6AQ9H0K4 717 aa10.85□□□□□ -0.67
EBF1-203ENST00000517373 TULP1O00294 542 aaPredicted RBP10.84□□□□□ -0.67
EBF1-203ENST00000517373 IL27Q8NEV9 243 aa10.84□□□□□ -0.67
EBF1-203ENST00000517373 EIF4G1Q04637 1599 aaKnown RBP10.84□□□□□ -0.67
EBF1-203ENST00000517373 BAZ1AQ9NRL2 1556 aaPredicted RBP10.84□□□□□ -0.67
EBF1-203ENST00000517373 ZMYND15Q9H091 742 aa10.84□□□□□ -0.67
EBF1-203ENST00000517373 SMARCA4P51532 1647 aa10.83□□□□□ -0.67
EBF1-203ENST00000517373 PDIA4P13667 645 aaKnown RBP10.83□□□□□ -0.68
EBF1-203ENST00000517373 FGD1P98174 961 aa10.83□□□□□ -0.68
EBF1-203ENST00000517373 WIZO95785 1651 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms