Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 SNORA70D-201ENST00000578836 135 ntBASIC5.54□□□□□ -1.52
LMO4P61968 AL139041.1-201ENST00000605480 610 ntBASIC5.54□□□□□ -1.52
LMO4P61968 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.54□□□□□ -1.52
LMO4P61968 MIR7109-201ENST00000613748 65 ntBASIC5.54□□□□□ -1.52
LMO4P61968 SNX18P10-201ENST00000625014 519 ntBASIC5.54□□□□□ -1.52
LMO4P61968 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.54□□□□□ -1.52
LMO4P61968 AC116631.1-202ENST00000640984 683 ntBASIC5.54□□□□□ -1.52
LMO4P61968 BRAFP1-201ENST00000445336 2703 ntBASIC5.54□□□□□ -1.52
LMO4P61968 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LMO4P61968 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LMO4P61968 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LMO4P61968 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.54□□□□□ -1.52
LMO4P61968 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LMO4P61968 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC5.54□□□□□ -1.52
LMO4P61968 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LMO4P61968 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LMO4P61968 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC5.54□□□□□ -1.52
LMO4P61968 USP13-203ENST00000496897 2747 ntTSL 2 BASIC5.54□□□□□ -1.52
LMO4P61968 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.53□□□□□ -1.52
LMO4P61968 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC5.53□□□□□ -1.52
LMO4P61968 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC5.53□□□□□ -1.52
LMO4P61968 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC5.53□□□□□ -1.52
LMO4P61968 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC5.53□□□□□ -1.52
LMO4P61968 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC5.53□□□□□ -1.52
LMO4P61968 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC5.53□□□□□ -1.52
LMO4P61968 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC5.53□□□□□ -1.52
LMO4P61968 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
LMO4P61968 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC5.53□□□□□ -1.52
LMO4P61968 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC5.53□□□□□ -1.52
LMO4P61968 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC5.53□□□□□ -1.52
LMO4P61968 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
LMO4P61968 MRPS6P2-201ENST00000381143 370 ntBASIC5.53□□□□□ -1.52
LMO4P61968 RAB5CP1-201ENST00000395972 580 ntBASIC5.53□□□□□ -1.52
LMO4P61968 CXADRP1-201ENST00000398098 1095 ntBASIC5.53□□□□□ -1.52
LMO4P61968 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.53□□□□□ -1.52
LMO4P61968 RN7SKP296-201ENST00000411185 341 ntBASIC5.53□□□□□ -1.52
LMO4P61968 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC5.53□□□□□ -1.52
LMO4P61968 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
LMO4P61968 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.53□□□□□ -1.52
LMO4P61968 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.53□□□□□ -1.52
LMO4P61968 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.53□□□□□ -1.52
LMO4P61968 MTND4LP12-201ENST00000448237 295 ntBASIC5.53□□□□□ -1.52
LMO4P61968 CCNJP1-201ENST00000450600 1149 ntBASIC5.53□□□□□ -1.52
LMO4P61968 LECT2-203ENST00000512872 762 ntTSL 5 BASIC5.53□□□□□ -1.52
LMO4P61968 RPL41P2-201ENST00000544920 409 ntBASIC5.53□□□□□ -1.52
LMO4P61968 FXNP1-201ENST00000555153 337 ntBASIC5.53□□□□□ -1.52
LMO4P61968 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.53□□□□□ -1.52
LMO4P61968 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.53□□□□□ -1.52
LMO4P61968 OR7A8P-201ENST00000595427 913 ntBASIC5.53□□□□□ -1.52
LMO4P61968 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.53□□□□□ -1.52
LMO4P61968 AC091768.1-201ENST00000609258 930 ntBASIC5.53□□□□□ -1.52
LMO4P61968 AC016252.1-201ENST00000609721 474 ntBASIC5.53□□□□□ -1.52
LMO4P61968 AL589743.6-201ENST00000611025 117 ntBASIC5.53□□□□□ -1.52
LMO4P61968 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.53□□□□□ -1.52
LMO4P61968 CXADRP3-202ENST00000617265 1100 ntBASIC5.53□□□□□ -1.52
LMO4P61968 AL591926.1-201ENST00000620542 217 ntBASIC5.53□□□□□ -1.52
LMO4P61968 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.53□□□□□ -1.52
LMO4P61968 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC5.53□□□□□ -1.52
LMO4P61968 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
LMO4P61968 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC5.53□□□□□ -1.52
LMO4P61968 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC5.53□□□□□ -1.52
LMO4P61968 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
LMO4P61968 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 AC034111.1-201ENST00000562143 3770 ntBASIC5.53□□□□□ -1.52
LMO4P61968 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LMO4P61968 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
LMO4P61968 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
LMO4P61968 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC5.53□□□□□ -1.52
LMO4P61968 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
LMO4P61968 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LMO4P61968 AL136981.1-203ENST00000451452 3844 ntBASIC5.53□□□□□ -1.52
LMO4P61968 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.53□□□□□ -1.52
LMO4P61968 AC022507.1-201ENST00000548349 1505 ntBASIC5.53□□□□□ -1.52
LMO4P61968 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC5.53□□□□□ -1.52
LMO4P61968 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
LMO4P61968 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LMO4P61968 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
LMO4P61968 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC5.52□□□□□ -1.53
LMO4P61968 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LMO4P61968 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LMO4P61968 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
LMO4P61968 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms