RNA–Protein interactions for RNA: ENST00000356918.8

NEK11-201, Transcript of NIMA related kinase 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK11, Length 1,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-201ENST00000356918 AEBP2Q6ZN18 517 aaPredicted RBP16.97■□□□□ 0.31
NEK11-201ENST00000356918 CHIC1Q5VXU3 224 aa16.31■□□□□ 0.2
NEK11-201ENST00000356918 SLC24A1O60721 1099 aa14.52□□□□□ -0.09
NEK11-201ENST00000356918 SENP3Q9H4L4 574 aaPredicted RBP14.5□□□□□ -0.09
NEK11-201ENST00000356918 PHF23Q9BUL5 403 aaPredicted RBP14.35□□□□□ -0.11
NEK11-201ENST00000356918 POTEDQ86YR6 584 aa13.84□□□□□ -0.19
NEK11-201ENST00000356918 MYT1Q01538 1121 aa13.81□□□□□ -0.2
NEK11-201ENST00000356918 TTBK1Q5TCY1 1321 aaPredicted RBP13.66□□□□□ -0.22
NEK11-201ENST00000356918 PELP1Q8IZL8 1130 aaKnown RBP13.59□□□□□ -0.23
NEK11-201ENST00000356918 FOXD1Q16676 465 aa13.46□□□□□ -0.25
NEK11-201ENST00000356918 DAXXQ9UER7 740 aaPredicted RBP13.45□□□□□ -0.26
NEK11-201ENST00000356918 PLPPR3Q6T4P5 718 aa13.27□□□□□ -0.28
NEK11-201ENST00000356918 NISCHQ9Y2I1 1504 aa13.2□□□□□ -0.3
NEK11-201ENST00000356918 APLP2Q06481 763 aa13.19□□□□□ -0.3
NEK11-201ENST00000356918 ERICH6Q7L0X2 663 aa13.19□□□□□ -0.3
NEK11-201ENST00000356918 PRKCSHP14314 528 aaPredicted RBP13.16□□□□□ -0.3
NEK11-201ENST00000356918 NCBP3Q53F19 620 aaKnown RBP12.93□□□□□ -0.34
NEK11-201ENST00000356918 EHMT2Q96KQ7 1210 aa12.88□□□□□ -0.35
NEK11-201ENST00000356918 MSH5O43196 834 aa12.75□□□□□ -0.37
NEK11-201ENST00000356918 RTN4Q9NQC3 1192 aaKnown RBP12.7□□□□□ -0.38
NEK11-201ENST00000356918 PPP6R1Q9UPN7 881 aa12.7□□□□□ -0.38
NEK11-201ENST00000356918 ADRA2BP18089 450 aa12.69□□□□□ -0.38
NEK11-201ENST00000356918 PIAS4Q8N2W9 510 aaPredicted RBP12.65□□□□□ -0.38
NEK11-201ENST00000356918 ARXQ96QS3 562 aa12.56□□□□□ -0.4
NEK11-201ENST00000356918 AMER1Q5JTC6 1135 aaPredicted RBP12.46□□□□□ -0.42
NEK11-201ENST00000356918 EIF5BO60841 1220 aaKnown RBP12.4□□□□□ -0.42
NEK11-201ENST00000356918 RANGAP1P46060 587 aaPredicted RBP12.4□□□□□ -0.42
NEK11-201ENST00000356918 TIMELESSQ9UNS1 1208 aa12.26□□□□□ -0.45
NEK11-201ENST00000356918 HOMEZQ8IX15 550 aa12.14□□□□□ -0.47
NEK11-201ENST00000356918 KCNA4P22459 653 aa12.11□□□□□ -0.47
NEK11-201ENST00000356918 TULP1O00294 542 aaPredicted RBP12.07□□□□□ -0.48
NEK11-201ENST00000356918 BCL11AQ9H165 835 aa12.06□□□□□ -0.48
NEK11-201ENST00000356918 KLHL34Q8N239 644 aa12.05□□□□□ -0.48
NEK11-201ENST00000356918 TAOK2Q9UL54 1235 aa11.95□□□□□ -0.5
NEK11-201ENST00000356918 PODXL2Q9NZ53 605 aa11.91□□□□□ -0.5
NEK11-201ENST00000356918 PLEKHG5O94827 1062 aa11.89□□□□□ -0.51
NEK11-201ENST00000356918 CSRNP3Q8WYN3 585 aa11.87□□□□□ -0.51
NEK11-201ENST00000356918 PPP4R3CPQ6ZMV5 832 aa11.8□□□□□ -0.52
NEK11-201ENST00000356918 BCANQ96GW7 911 aa11.78□□□□□ -0.52
NEK11-201ENST00000356918 FAM9AQ8IZU1 332 aaPredicted RBP11.76□□□□□ -0.53
NEK11-201ENST00000356918 TPRNQ4KMQ1 711 aa11.75□□□□□ -0.53
NEK11-201ENST00000356918 NPM2Q86SE8 214 aaKnown RBP11.7□□□□□ -0.54
NEK11-201ENST00000356918 CCDC180Q9P1Z9 1646 aa11.68□□□□□ -0.54
NEK11-201ENST00000356918 GTF3C3Q9Y5Q9 886 aa11.68□□□□□ -0.54
NEK11-201ENST00000356918 SCAF1Q9H7N4 1312 aaKnown RBP11.66□□□□□ -0.54
NEK11-201ENST00000356918 MAPK8IP2Q13387 824 aaPredicted RBP11.59□□□□□ -0.55
NEK11-201ENST00000356918 SLC4A1APQ9BWU0 796 aaKnown RBP11.55□□□□□ -0.56
NEK11-201ENST00000356918 FBXO3Q9UK99 471 aa11.55□□□□□ -0.56
NEK11-201ENST00000356918 C14orf37Q86TY3 774 aa11.54□□□□□ -0.56
NEK11-201ENST00000356918 DMRT2Q9Y5R5 561 aa11.51□□□□□ -0.57
NEK11-201ENST00000356918 UBE2Q2Q8WVN8 375 aa11.51□□□□□ -0.57
NEK11-201ENST00000356918 PDIA4P13667 645 aaKnown RBP11.49□□□□□ -0.57
NEK11-201ENST00000356918 NPM3O75607 178 aaKnown RBP11.49□□□□□ -0.57
NEK11-201ENST00000356918 PLCB2Q00722 1185 aa11.42□□□□□ -0.58
NEK11-201ENST00000356918 CACNB1Q02641 598 aaPredicted RBP11.39□□□□□ -0.59
NEK11-201ENST00000356918 TMEM132AQ24JP5 1023 aa11.38□□□□□ -0.59
NEK11-201ENST00000356918 DCAF8L2P0C7V8 631 aa11.38□□□□□ -0.59
NEK11-201ENST00000356918 HAP1P54257 671 aaPredicted RBP11.36□□□□□ -0.59
NEK11-201ENST00000356918 CNKSR2Q8WXI2 1034 aa11.33□□□□□ -0.6
NEK11-201ENST00000356918 LOC105371045A0A1W2PR82 267 aa11.32□□□□□ -0.6
NEK11-201ENST00000356918 NEFLP07196 543 aa11.32□□□□□ -0.6
NEK11-201ENST00000356918 PDE4CQ08493 712 aa11.31□□□□□ -0.6
NEK11-201ENST00000356918 TRIM26Q12899 539 aaPredicted RBP11.3□□□□□ -0.6
NEK11-201ENST00000356918 HRCP23327 699 aa11.27□□□□□ -0.6
NEK11-201ENST00000356918 PKNOX2Q96KN3 472 aa11.26□□□□□ -0.61
NEK11-201ENST00000356918 CENPBP07199 599 aaPredicted RBP11.24□□□□□ -0.61
NEK11-201ENST00000356918 CHMP4AQ9BY43 222 aa11.24□□□□□ -0.61
NEK11-201ENST00000356918 ZBTB22O15209 634 aa11.21□□□□□ -0.61
NEK11-201ENST00000356918 TAF7LQ5H9L4 462 aa11.19□□□□□ -0.62
NEK11-201ENST00000356918 BRD2P25440 801 aaKnown RBP11.17□□□□□ -0.62
NEK11-201ENST00000356918 CDK11AQ9UQ88 783 aaPredicted RBP11.17□□□□□ -0.62
NEK11-201ENST00000356918 CDK11BP21127 795 aaKnown RBP11.15□□□□□ -0.62
NEK11-201ENST00000356918 HOXD11P31277 338 aaPredicted RBP11.15□□□□□ -0.63
NEK11-201ENST00000356918 SAMD1Q6SPF0 538 aaPredicted RBP11.14□□□□□ -0.63
NEK11-201ENST00000356918 SUPT5HO00267 1087 aaKnown RBP11.13□□□□□ -0.63
NEK11-201ENST00000356918 RNF216Q9NWF9 866 aaPredicted RBP11.13□□□□□ -0.63
NEK11-201ENST00000356918 ZCCHC6Q5VYS8 1495 aaKnown RBP11.09□□□□□ -0.63
NEK11-201ENST00000356918 VSIG10Q8N0Z9 540 aa11.08□□□□□ -0.64
NEK11-201ENST00000356918 DCAF8L1A6NGE4 600 aa11.06□□□□□ -0.64
NEK11-201ENST00000356918 UBTFP17480 764 aaKnown RBP11.06□□□□□ -0.64
NEK11-201ENST00000356918 DHX37Q8IY37 1157 aaKnown RBP11.05□□□□□ -0.64
NEK11-201ENST00000356918 DCAF1Q9Y4B6 1507 aa11.05□□□□□ -0.64
NEK11-201ENST00000356918 DNAJC5BQ9UF47 199 aa11.02□□□□□ -0.64
NEK11-201ENST00000356918 SHROOM4Q9ULL8 1493 aa11.02□□□□□ -0.65
NEK11-201ENST00000356918 HSP90B1P14625 803 aaKnown RBP11□□□□□ -0.65
NEK11-201ENST00000356918 MYO15BQ96JP2 1530 aa11□□□□□ -0.65
NEK11-201ENST00000356918 BCL11BQ9C0K0 894 aaPredicted RBP11□□□□□ -0.65
NEK11-201ENST00000356918 HMGB1P09429 215 aaKnown RBP10.99□□□□□ -0.65
NEK11-201ENST00000356918 FGD1P98174 961 aa10.98□□□□□ -0.65
NEK11-201ENST00000356918 FOXD4L1Q9NU39 408 aa10.95□□□□□ -0.66
NEK11-201ENST00000356918 ANO8Q9HCE9 1232 aaPredicted RBP10.93□□□□□ -0.66
NEK11-201ENST00000356918 ABCC9O60706 1549 aa10.93□□□□□ -0.66
NEK11-201ENST00000356918 ANP32EQ9BTT0 268 aa10.91□□□□□ -0.66
NEK11-201ENST00000356918 KDM2AQ9Y2K7 1162 aa10.87□□□□□ -0.67
NEK11-201ENST00000356918 NACADO15069 1562 aa10.87□□□□□ -0.67
NEK11-201ENST00000356918 ZNF326Q5BKZ1 582 aaKnown RBP10.86□□□□□ -0.67
NEK11-201ENST00000356918 IGSF3O75054 1194 aa10.85□□□□□ -0.67
NEK11-201ENST00000356918 RSPH4AQ5TD94 716 aa10.83□□□□□ -0.68
NEK11-201ENST00000356918 BCCIPQ9P287 314 aaKnown RBP eCLIP10.82□□□□□ -0.68
NEK11-201ENST00000356918 RNF39Q9H2S5 420 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms