Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC8.76□□□□□ -1.01
HLA-CQ95604 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC8.76□□□□□ -1.01
HLA-CQ95604 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC8.76□□□□□ -1.01
HLA-CQ95604 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC8.76□□□□□ -1.01
HLA-CQ95604 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC8.76□□□□□ -1.01
HLA-CQ95604 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC8.76□□□□□ -1.01
HLA-CQ95604 AL391840.1-201ENST00000571144 367 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 AC093826.2-201ENST00000579042 108 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC8.76□□□□□ -1.01
HLA-CQ95604 SYPL1P2-201ENST00000582878 727 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 MIR4642-201ENST00000583943 82 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 AL137190.1-201ENST00000603288 282 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC8.76□□□□□ -1.01
HLA-CQ95604 USP12-203ENST00000620323 349 ntTSL 3 BASIC8.76□□□□□ -1.01
HLA-CQ95604 AC103564.3-201ENST00000621194 220 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 AC005383.1-201ENST00000622689 534 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 AP003122.6-201ENST00000623831 495 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 RPSAP68-201ENST00000625020 438 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 AC007221.2-201ENST00000634367 948 ntTSL 5 BASIC8.76□□□□□ -1.01
HLA-CQ95604 TTC33-205ENST00000636106 2252 ntTSL 5 BASIC8.76□□□□□ -1.01
HLA-CQ95604 SLC13A3-210ENST00000472148 3283 ntTSL 5 BASIC8.76□□□□□ -1.01
HLA-CQ95604 ETV3-202ENST00000368192 5254 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-CQ95604 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC8.76□□□□□ -1.01
HLA-CQ95604 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-CQ95604 SOX9-AS1-217ENST00000623935 1563 ntTSL 5 BASIC8.76□□□□□ -1.01
HLA-CQ95604 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-CQ95604 DENND2A-208ENST00000492720 3614 ntTSL 5 BASIC8.76□□□□□ -1.01
HLA-CQ95604 CEACAM8-201ENST00000244336 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-CQ95604 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-CQ95604 XRCC6P3-201ENST00000422187 1621 ntBASIC8.76□□□□□ -1.01
HLA-CQ95604 CCDC90B-214ENST00000529689 4014 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
HLA-CQ95604 SYT6-202ENST00000607941 4352 ntTSL 2 BASIC8.75□□□□□ -1.01
HLA-CQ95604 TEX10-204ENST00000535814 3006 ntTSL 2 BASIC8.75□□□□□ -1.01
HLA-CQ95604 BCL9P1-201ENST00000506012 2561 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 CTDSPL2-201ENST00000260327 6828 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-CQ95604 AC137056.2-201ENST00000624055 1958 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 SPATA31D5P-201ENST00000376459 4784 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-CQ95604 TMEM35A-201ENST00000372930 2195 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-CQ95604 TAPT1-AS1-201ENST00000570786 2165 ntTSL 5 BASIC8.75□□□□□ -1.01
HLA-CQ95604 LRRC37A11P-201ENST00000425901 3580 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-CQ95604 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-CQ95604 AC239799.2-201ENST00000622359 2002 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-CQ95604 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
HLA-CQ95604 PCYT1B-203ENST00000379145 5307 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-CQ95604 RPAP1-202ENST00000561603 3906 ntTSL 5 BASIC8.75□□□□□ -1.01
HLA-CQ95604 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-CQ95604 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-CQ95604 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
HLA-CQ95604 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC8.75□□□□□ -1.01
HLA-CQ95604 SNORA63-201ENST00000363450 132 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 SH3KBP1-203ENST00000379716 3819 ntTSL 2 BASIC8.75□□□□□ -1.01
HLA-CQ95604 Y_RNA.453-201ENST00000384223 109 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 SNORA57.2-201ENST00000391265 128 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 DNAJA1P3-201ENST00000399417 1194 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 ZNF37CP-201ENST00000406795 241 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC8.75□□□□□ -1.01
HLA-CQ95604 HCG21-204ENST00000419481 605 ntTSL 3 BASIC8.75□□□□□ -1.01
HLA-CQ95604 AC093580.1-201ENST00000420549 671 ntTSL 3 BASIC8.75□□□□□ -1.01
HLA-CQ95604 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC8.75□□□□□ -1.01
HLA-CQ95604 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC8.75□□□□□ -1.01
HLA-CQ95604 MORF4L1P5-201ENST00000433352 961 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 AC000362.1-201ENST00000433725 425 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 MTND1P28-201ENST00000435623 950 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-CQ95604 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC8.75□□□□□ -1.01
HLA-CQ95604 AC098583.2-201ENST00000504151 372 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC8.75□□□□□ -1.01
HLA-CQ95604 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC8.75□□□□□ -1.01
HLA-CQ95604 AC023632.1-201ENST00000518463 375 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC8.75□□□□□ -1.01
HLA-CQ95604 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC8.75□□□□□ -1.01
HLA-CQ95604 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC8.75□□□□□ -1.01
HLA-CQ95604 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-CQ95604 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC8.75□□□□□ -1.01
HLA-CQ95604 AL807752.5-201ENST00000569497 820 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 AC015909.4-201ENST00000577175 578 ntTSL 4 BASIC8.75□□□□□ -1.01
HLA-CQ95604 AP005119.2-201ENST00000579735 1105 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC8.75□□□□□ -1.01
HLA-CQ95604 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC8.75□□□□□ -1.01
HLA-CQ95604 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC8.75□□□□□ -1.01
HLA-CQ95604 AC015871.2-201ENST00000603605 948 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC8.75□□□□□ -1.01
HLA-CQ95604 LINC02391-201ENST00000615716 800 ntTSL 5 BASIC8.75□□□□□ -1.01
HLA-CQ95604 RN7SL301P-202ENST00000618767 298 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC8.75□□□□□ -1.01
HLA-CQ95604 AC087893.2-201ENST00000623272 255 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC8.75□□□□□ -1.01
HLA-CQ95604 LINC00598-212ENST00000637124 905 ntTSL 5 BASIC8.75□□□□□ -1.01
HLA-CQ95604 CAB39L-212ENST00000610540 3692 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
HLA-CQ95604 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-CQ95604 B4GALT6-202ENST00000306851 3891 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-CQ95604 SGK1-203ENST00000367857 2414 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-CQ95604 AL139811.2-201ENST00000373465 1630 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 LAMB4-203ENST00000418464 2600 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
HLA-CQ95604 GUCY1A3-204ENST00000455639 2631 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
HLA-CQ95604 AL031595.3-201ENST00000624919 14262 ntBASIC8.75□□□□□ -1.01
HLA-CQ95604 USP30-203ENST00000392784 2483 ntTSL 2 BASIC8.75□□□□□ -1.01
HLA-CQ95604 C8orf44-201ENST00000390159 1817 ntAPPRIS P2 TSL 2 BASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms