RNA–Protein interactions for RNA: ENST00000622359.1

AC239799.2-201, humanhuman

BASIC

Gene AC239799.2, Length 2,002 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239799.2-201ENST00000622359 AEBP2Q6ZN18 517 aaPredicted RBP27.4■■□□□ 1.98
AC239799.2-201ENST00000622359 CHIC1Q5VXU3 224 aa25.78■■□□□ 1.72
AC239799.2-201ENST00000622359 SENP3Q9H4L4 574 aaPredicted RBP23.69■■□□□ 1.38
AC239799.2-201ENST00000622359 PHF23Q9BUL5 403 aaPredicted RBP23.17■■□□□ 1.3
AC239799.2-201ENST00000622359 POTEDQ86YR6 584 aa22.3■■□□□ 1.16
AC239799.2-201ENST00000622359 FOXD1Q16676 465 aa22.1■■□□□ 1.13
AC239799.2-201ENST00000622359 MSH5O43196 834 aa21.2■□□□□ 0.98
AC239799.2-201ENST00000622359 PIAS4Q8N2W9 510 aaPredicted RBP20.48■□□□□ 0.87
AC239799.2-201ENST00000622359 NISCHQ9Y2I1 1504 aa20.06■□□□□ 0.8
AC239799.2-201ENST00000622359 PPP6R1Q9UPN7 881 aa19.83■□□□□ 0.76
AC239799.2-201ENST00000622359 ADRA2BP18089 450 aa19.76■□□□□ 0.75
AC239799.2-201ENST00000622359 PLPPR3Q6T4P5 718 aa19.69■□□□□ 0.74
AC239799.2-201ENST00000622359 CACNB1Q02641 598 aaPredicted RBP18.81■□□□□ 0.6
AC239799.2-201ENST00000622359 DMRT2Q9Y5R5 561 aa18.59■□□□□ 0.57
AC239799.2-201ENST00000622359 MAPK8IP2Q13387 824 aaPredicted RBP18.43■□□□□ 0.54
AC239799.2-201ENST00000622359 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
AC239799.2-201ENST00000622359 DCAF8L1A6NGE4 600 aa17.97■□□□□ 0.47
AC239799.2-201ENST00000622359 RNF39Q9H2S5 420 aa17.9■□□□□ 0.46
AC239799.2-201ENST00000622359 C1QBPQ07021 282 aaKnown RBP17.65■□□□□ 0.42
AC239799.2-201ENST00000622359 HOXD11P31277 338 aaPredicted RBP17.48■□□□□ 0.39
AC239799.2-201ENST00000622359 CCDC180Q9P1Z9 1646 aa17.47■□□□□ 0.39
AC239799.2-201ENST00000622359 POTEHQ6S545 545 aa17.31■□□□□ 0.36
AC239799.2-201ENST00000622359 RNF216Q9NWF9 866 aaPredicted RBP17.12■□□□□ 0.33
AC239799.2-201ENST00000622359 DNAJC5BQ9UF47 199 aa17.12■□□□□ 0.33
AC239799.2-201ENST00000622359 PPP4R3CPQ6ZMV5 832 aa17.09■□□□□ 0.33
AC239799.2-201ENST00000622359 CNKSR2Q8WXI2 1034 aa17.04■□□□□ 0.32
AC239799.2-201ENST00000622359 ZCCHC6Q5VYS8 1495 aaKnown RBP16.95■□□□□ 0.3
AC239799.2-201ENST00000622359 SHROOM4Q9ULL8 1493 aa16.89■□□□□ 0.29
AC239799.2-201ENST00000622359 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.76■□□□□ 0.27
AC239799.2-201ENST00000622359 ABCC9O60706 1549 aa16.66■□□□□ 0.26
AC239799.2-201ENST00000622359 DCAF8L2P0C7V8 631 aa16.61■□□□□ 0.25
AC239799.2-201ENST00000622359 SUPT5HO00267 1087 aaKnown RBP16.57■□□□□ 0.24
AC239799.2-201ENST00000622359 DCAF1Q9Y4B6 1507 aa16.53■□□□□ 0.24
AC239799.2-201ENST00000622359 DSG3P32926 999 aa16.43■□□□□ 0.22
AC239799.2-201ENST00000622359 CAPN15O75808 1086 aa16.37■□□□□ 0.21
AC239799.2-201ENST00000622359 MYO15BQ96JP2 1530 aa16.34■□□□□ 0.21
AC239799.2-201ENST00000622359 NACADO15069 1562 aa16.3■□□□□ 0.2
AC239799.2-201ENST00000622359 NCBP3Q53F19 620 aaKnown RBP16.24■□□□□ 0.19
AC239799.2-201ENST00000622359 SPINK5Q9NQ38 1064 aaPredicted RBP16.24■□□□□ 0.19
AC239799.2-201ENST00000622359 RB1CC1Q8TDY2 1594 aa16.2■□□□□ 0.18
AC239799.2-201ENST00000622359 U3KPZ7 1027 aaPredicted RBP16.18■□□□□ 0.18
AC239799.2-201ENST00000622359 SCRIBQ14160 1630 aa16.08■□□□□ 0.16
AC239799.2-201ENST00000622359 UNC13AQ9UPW8 1703 aa15.87■□□□□ 0.13
AC239799.2-201ENST00000622359 NPM3O75607 178 aaKnown RBP15.86■□□□□ 0.13
AC239799.2-201ENST00000622359 ABCB7O75027 752 aa15.85■□□□□ 0.13
AC239799.2-201ENST00000622359 TRHP20396 242 aaPredicted RBP15.85■□□□□ 0.13
AC239799.2-201ENST00000622359 APLP2Q06481 763 aa15.84■□□□□ 0.13
AC239799.2-201ENST00000622359 RSF1Q96T23 1441 aaPredicted RBP15.84■□□□□ 0.13
AC239799.2-201ENST00000622359 RBM42Q9BTD8 480 aaKnown RBP15.82■□□□□ 0.12
AC239799.2-201ENST00000622359 ZNF219Q9P2Y4 722 aaPredicted RBP15.81■□□□□ 0.12
AC239799.2-201ENST00000622359 CHRDL2Q6WN34 429 aa15.8■□□□□ 0.12
AC239799.2-201ENST00000622359 SP7Q8TDD2 431 aaPredicted RBP15.77■□□□□ 0.12
AC239799.2-201ENST00000622359 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.1
AC239799.2-201ENST00000622359 BICRAQ9NZM4 1560 aa15.69■□□□□ 0.1
AC239799.2-201ENST00000622359 LOC105371045A0A1W2PR82 267 aa15.61■□□□□ 0.09
AC239799.2-201ENST00000622359 CECR2Q9BXF3 1484 aa15.59■□□□□ 0.09
AC239799.2-201ENST00000622359 MROH2BQ7Z745 1585 aa15.55■□□□□ 0.08
AC239799.2-201ENST00000622359 HRCP23327 699 aa15.55■□□□□ 0.08
AC239799.2-201ENST00000622359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.53■□□□□ 0.08
AC239799.2-201ENST00000622359 HNRNPUL2Q1KMD3 747 aaKnown RBP15.53■□□□□ 0.08
AC239799.2-201ENST00000622359 PCGF6Q9BYE7 350 aa15.52■□□□□ 0.08
AC239799.2-201ENST00000622359 TRIM41Q8WV44 630 aa15.5■□□□□ 0.07
AC239799.2-201ENST00000622359 BAZ1AQ9NRL2 1556 aaPredicted RBP15.44■□□□□ 0.06
AC239799.2-201ENST00000622359 WIZO95785 1651 aa15.43■□□□□ 0.06
AC239799.2-201ENST00000622359 SMARCA4P51532 1647 aa15.38■□□□□ 0.05
AC239799.2-201ENST00000622359 SLC4A2P04920 1241 aa15.36■□□□□ 0.05
AC239799.2-201ENST00000622359 SAMD1Q6SPF0 538 aaPredicted RBP15.36■□□□□ 0.05
AC239799.2-201ENST00000622359 TRIM26Q12899 539 aaPredicted RBP15.33■□□□□ 0.04
AC239799.2-201ENST00000622359 FAM9AQ8IZU1 332 aaPredicted RBP15.28■□□□□ 0.04
AC239799.2-201ENST00000622359 TOP2AP11388 1531 aaKnown RBP15.26■□□□□ 0.03
AC239799.2-201ENST00000622359 EIF4G1Q04637 1599 aaKnown RBP15.25■□□□□ 0.03
AC239799.2-201ENST00000622359 HAX1O00165 279 aa15.25■□□□□ 0.03
AC239799.2-201ENST00000622359 AKT1S1Q96B36 256 aa15.2■□□□□ 0.02
AC239799.2-201ENST00000622359 PEG3Q9GZU2 1588 aa15.18■□□□□ 0.02
AC239799.2-201ENST00000622359 PIP4P2Q8N4L2 257 aa15.18■□□□□ 0.02
AC239799.2-201ENST00000622359 CCDC88BA6NC98 1476 aa15.17■□□□□ 0.02
AC239799.2-201ENST00000622359 ATAD2BQ9ULI0 1458 aa15.16■□□□□ 0.02
AC239799.2-201ENST00000622359 POLA2Q14181 598 aa15.16■□□□□ 0.02
AC239799.2-201ENST00000622359 SMARCA2P51531 1590 aa15.15■□□□□ 0.02
AC239799.2-201ENST00000622359 PPARGC1BQ86YN6 1023 aaKnown RBP15.12■□□□□ 0.01
AC239799.2-201ENST00000622359 BAZ1BQ9UIG0 1483 aaKnown RBP15.09■□□□□ 0.01
AC239799.2-201ENST00000622359 EHMT2Q96KQ7 1210 aa15.07■□□□□ 0
AC239799.2-201ENST00000622359 CC2D2AQ9P2K1 1620 aa15.06■□□□□ 0
AC239799.2-201ENST00000622359 ABCC8Q09428 1581 aa15.04■□□□□ -0
AC239799.2-201ENST00000622359 NCAPD3P42695 1498 aa15.04■□□□□ -0
AC239799.2-201ENST00000622359 REM2Q8IYK8 340 aaPredicted RBP15.02□□□□□ -0.01
AC239799.2-201ENST00000622359 HMGXB3Q12766 1538 aa15.01□□□□□ -0.01
AC239799.2-201ENST00000622359 ZEB1P37275 1124 aaPredicted RBP15□□□□□ -0.01
AC239799.2-201ENST00000622359 EEA1Q15075 1411 aa14.94□□□□□ -0.02
AC239799.2-201ENST00000622359 FXR2P51116 673 aaKnown RBP eCLIP14.93□□□□□ -0.02
AC239799.2-201ENST00000622359 SOGA1O94964 1423 aa14.92□□□□□ -0.02
AC239799.2-201ENST00000622359 CSRNP3Q8WYN3 585 aa14.88□□□□□ -0.03
AC239799.2-201ENST00000622359 ZBTB12Q9Y330 459 aaPredicted RBP14.88□□□□□ -0.03
AC239799.2-201ENST00000622359 TNIKQ9UKE5 1360 aa14.88□□□□□ -0.03
AC239799.2-201ENST00000622359 WRNQ14191 1432 aaPredicted RBP eCLIP14.87□□□□□ -0.03
AC239799.2-201ENST00000622359 PITPNM1O00562 1244 aa14.86□□□□□ -0.03
AC239799.2-201ENST00000622359 CEP162Q5TB80 1403 aa14.84□□□□□ -0.03
AC239799.2-201ENST00000622359 RUSC2Q8N2Y8 1516 aa14.83□□□□□ -0.03
AC239799.2-201ENST00000622359 EVX2Q03828 476 aa14.83□□□□□ -0.04
AC239799.2-201ENST00000622359 LHX8Q68G74 356 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms