RNA–Protein interactions for RNA: ENST00000372930.4

TMEM35A-201, Transcript of transmembrane protein 35A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM35A, Length 2,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35A-201ENST00000372930 NISCHQ9Y2I1 1504 aa18.7■□□□□ 0.58
TMEM35A-201ENST00000372930 PELP1Q8IZL8 1130 aaKnown RBP17.35■□□□□ 0.37
TMEM35A-201ENST00000372930 MYT1Q01538 1121 aa17.21■□□□□ 0.34
TMEM35A-201ENST00000372930 TTBK1Q5TCY1 1321 aaPredicted RBP16.71■□□□□ 0.27
TMEM35A-201ENST00000372930 SLC24A1O60721 1099 aa16.49■□□□□ 0.23
TMEM35A-201ENST00000372930 PRKCSHP14314 528 aaPredicted RBP16.43■□□□□ 0.22
TMEM35A-201ENST00000372930 CCDC180Q9P1Z9 1646 aa16.19■□□□□ 0.18
TMEM35A-201ENST00000372930 APLP2Q06481 763 aa16.13■□□□□ 0.17
TMEM35A-201ENST00000372930 ERICH6Q7L0X2 663 aa16.05■□□□□ 0.16
TMEM35A-201ENST00000372930 BCL11AQ9H165 835 aa15.71■□□□□ 0.11
TMEM35A-201ENST00000372930 ZCCHC6Q5VYS8 1495 aaKnown RBP15.69■□□□□ 0.1
TMEM35A-201ENST00000372930 DCAF8L2P0C7V8 631 aa15.66■□□□□ 0.1
TMEM35A-201ENST00000372930 DAXXQ9UER7 740 aaPredicted RBP15.66■□□□□ 0.1
TMEM35A-201ENST00000372930 ABCC9O60706 1549 aa15.52■□□□□ 0.07
TMEM35A-201ENST00000372930 FAM9AQ8IZU1 332 aaPredicted RBP15.49■□□□□ 0.07
TMEM35A-201ENST00000372930 HRCP23327 699 aa15.43■□□□□ 0.06
TMEM35A-201ENST00000372930 SHROOM4Q9ULL8 1493 aa15.42■□□□□ 0.06
TMEM35A-201ENST00000372930 SCAF1Q9H7N4 1312 aaKnown RBP15.42■□□□□ 0.06
TMEM35A-201ENST00000372930 DCAF1Q9Y4B6 1507 aa15.38■□□□□ 0.05
TMEM35A-201ENST00000372930 MYO15BQ96JP2 1530 aa15.18■□□□□ 0.02
TMEM35A-201ENST00000372930 NACADO15069 1562 aa15.14■□□□□ 0.01
TMEM35A-201ENST00000372930 EIF5BO60841 1220 aaKnown RBP15.14■□□□□ 0.01
TMEM35A-201ENST00000372930 SCRIBQ14160 1630 aa15.04■□□□□ -0
TMEM35A-201ENST00000372930 RB1CC1Q8TDY2 1594 aa15.03■□□□□ -0
TMEM35A-201ENST00000372930 CENPBP07199 599 aaPredicted RBP14.97□□□□□ -0.01
TMEM35A-201ENST00000372930 PPARGC1BQ86YN6 1023 aaKnown RBP14.87□□□□□ -0.03
TMEM35A-201ENST00000372930 SUPT5HO00267 1087 aaKnown RBP14.85□□□□□ -0.03
TMEM35A-201ENST00000372930 PLEKHG5O94827 1062 aa14.82□□□□□ -0.04
TMEM35A-201ENST00000372930 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
TMEM35A-201ENST00000372930 UNC13AQ9UPW8 1703 aa14.69□□□□□ -0.06
TMEM35A-201ENST00000372930 UBE2Q2Q8WVN8 375 aa14.67□□□□□ -0.06
TMEM35A-201ENST00000372930 ANP32EQ9BTT0 268 aa14.66□□□□□ -0.06
TMEM35A-201ENST00000372930 CECR2Q9BXF3 1484 aa14.6□□□□□ -0.07
TMEM35A-201ENST00000372930 BICRAQ9NZM4 1560 aa14.59□□□□□ -0.07
TMEM35A-201ENST00000372930 ACIN1Q9UKV3 1341 aaKnown RBP14.59□□□□□ -0.07
TMEM35A-201ENST00000372930 NCBP3Q53F19 620 aaKnown RBP14.58□□□□□ -0.08
TMEM35A-201ENST00000372930 RSF1Q96T23 1441 aaPredicted RBP14.55□□□□□ -0.08
TMEM35A-201ENST00000372930 PODXL2Q9NZ53 605 aa14.53□□□□□ -0.08
TMEM35A-201ENST00000372930 CSRNP3Q8WYN3 585 aa14.49□□□□□ -0.09
TMEM35A-201ENST00000372930 ANO8Q9HCE9 1232 aaPredicted RBP14.49□□□□□ -0.09
TMEM35A-201ENST00000372930 MROH2BQ7Z745 1585 aa14.48□□□□□ -0.09
TMEM35A-201ENST00000372930 GTF3C3Q9Y5Q9 886 aa14.46□□□□□ -0.09
TMEM35A-201ENST00000372930 BAZ1AQ9NRL2 1556 aaPredicted RBP14.42□□□□□ -0.1
TMEM35A-201ENST00000372930 NEUROD1Q13562 356 aa14.4□□□□□ -0.1
TMEM35A-201ENST00000372930 SMARCA4P51532 1647 aa14.35□□□□□ -0.11
TMEM35A-201ENST00000372930 WIZO95785 1651 aa14.35□□□□□ -0.11
TMEM35A-201ENST00000372930 PKNOX2Q96KN3 472 aa14.34□□□□□ -0.11
TMEM35A-201ENST00000372930 ARXQ96QS3 562 aa14.29□□□□□ -0.12
TMEM35A-201ENST00000372930 KLHL34Q8N239 644 aa14.28□□□□□ -0.12
TMEM35A-201ENST00000372930 RANGAP1P46060 587 aaPredicted RBP14.22□□□□□ -0.13
TMEM35A-201ENST00000372930 PCGF6Q9BYE7 350 aa14.17□□□□□ -0.14
TMEM35A-201ENST00000372930 EIF4G1Q04637 1599 aaKnown RBP14.17□□□□□ -0.14
TMEM35A-201ENST00000372930 ATAD2BQ9ULI0 1458 aa14.16□□□□□ -0.14
TMEM35A-201ENST00000372930 TOP2AP11388 1531 aaKnown RBP14.16□□□□□ -0.14
TMEM35A-201ENST00000372930 CHIC1Q5VXU3 224 aa14.15□□□□□ -0.15
TMEM35A-201ENST00000372930 PEG3Q9GZU2 1588 aa14.14□□□□□ -0.15
TMEM35A-201ENST00000372930 ZEB1P37275 1124 aaPredicted RBP14.13□□□□□ -0.15
TMEM35A-201ENST00000372930 PLPPR3Q6T4P5 718 aa14.12□□□□□ -0.15
TMEM35A-201ENST00000372930 SMARCA2P51531 1590 aa14.1□□□□□ -0.15
TMEM35A-201ENST00000372930 BAZ1BQ9UIG0 1483 aaKnown RBP14.09□□□□□ -0.15
TMEM35A-201ENST00000372930 TIMELESSQ9UNS1 1208 aa14.09□□□□□ -0.15
TMEM35A-201ENST00000372930 SALL2Q9Y467 1007 aaPredicted RBP14.09□□□□□ -0.15
TMEM35A-201ENST00000372930 CCDC88BA6NC98 1476 aa14.08□□□□□ -0.16
TMEM35A-201ENST00000372930 RTN4Q9NQC3 1192 aaKnown RBP14.06□□□□□ -0.16
TMEM35A-201ENST00000372930 PDIA4P13667 645 aaKnown RBP14.05□□□□□ -0.16
TMEM35A-201ENST00000372930 NEFLP07196 543 aa14.02□□□□□ -0.17
TMEM35A-201ENST00000372930 NCAPD3P42695 1498 aa14.02□□□□□ -0.17
TMEM35A-201ENST00000372930 CCDC136Q96JN2 1154 aa14□□□□□ -0.17
TMEM35A-201ENST00000372930 PDE4CQ08493 712 aa13.99□□□□□ -0.17
TMEM35A-201ENST00000372930 CC2D2AQ9P2K1 1620 aa13.97□□□□□ -0.17
TMEM35A-201ENST00000372930 ERICH6BQ5W0A0 696 aa13.97□□□□□ -0.17
TMEM35A-201ENST00000372930 AEBP2Q6ZN18 517 aaPredicted RBP13.96□□□□□ -0.18
TMEM35A-201ENST00000372930 HMGXB3Q12766 1538 aa13.95□□□□□ -0.18
TMEM35A-201ENST00000372930 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
TMEM35A-201ENST00000372930 TRIM41Q8WV44 630 aa13.91□□□□□ -0.18
TMEM35A-201ENST00000372930 TSHZ2Q9NRE2 1034 aa13.83□□□□□ -0.19
TMEM35A-201ENST00000372930 FGD1P98174 961 aa13.81□□□□□ -0.2
TMEM35A-201ENST00000372930 ABCC8Q09428 1581 aa13.8□□□□□ -0.2
TMEM35A-201ENST00000372930 DNAJC5BQ9UF47 199 aa13.78□□□□□ -0.2
TMEM35A-201ENST00000372930 HOMEZQ8IX15 550 aa13.77□□□□□ -0.21
TMEM35A-201ENST00000372930 BCL11BQ9C0K0 894 aaPredicted RBP13.77□□□□□ -0.21
TMEM35A-201ENST00000372930 TULP1O00294 542 aaPredicted RBP13.76□□□□□ -0.21
TMEM35A-201ENST00000372930 MYT1LQ9UL68 1186 aa13.75□□□□□ -0.21
TMEM35A-201ENST00000372930 CFTRP13569 1480 aa13.72□□□□□ -0.21
TMEM35A-201ENST00000372930 TAF7LQ5H9L4 462 aa13.7□□□□□ -0.22
TMEM35A-201ENST00000372930 CADPSQ9ULU8 1353 aa13.7□□□□□ -0.22
TMEM35A-201ENST00000372930 WRNQ14191 1432 aaPredicted RBP eCLIP13.69□□□□□ -0.22
TMEM35A-201ENST00000372930 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.69□□□□□ -0.22
TMEM35A-201ENST00000372930 LOC105371045A0A1W2PR82 267 aa13.67□□□□□ -0.22
TMEM35A-201ENST00000372930 AAMPQ13685 434 aa13.65□□□□□ -0.22
TMEM35A-201ENST00000372930 A0A0U1RQG5 324 aaPredicted RBP13.62□□□□□ -0.23
TMEM35A-201ENST00000372930 SYNJ1O43426 1573 aa13.61□□□□□ -0.23
TMEM35A-201ENST00000372930 NESP48681 1621 aa13.61□□□□□ -0.23
TMEM35A-201ENST00000372930 DEKP35659 375 aaKnown RBP13.61□□□□□ -0.23
TMEM35A-201ENST00000372930 CLSPNQ9HAW4 1339 aa13.59□□□□□ -0.23
TMEM35A-201ENST00000372930 SOGA1O94964 1423 aa13.57□□□□□ -0.24
TMEM35A-201ENST00000372930 ZMYND15Q9H091 742 aa13.56□□□□□ -0.24
TMEM35A-201ENST00000372930 FANCD2Q9BXW9 1451 aa13.54□□□□□ -0.24
TMEM35A-201ENST00000372930 RBM10P98175 930 aaKnown RBP13.54□□□□□ -0.24
TMEM35A-201ENST00000372930 CUX1P39880 1505 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms