Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 ACVR2B-201ENST00000352511 11821 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.842e-6■□□□□ 10
PRPF8Q6P2Q9 SEPT10-212ENST00000483047 456 ntTSL 1 (best)5.7□□□□□ -1.52e-6■□□□□ 10
PRPF8Q6P2Q9 SUPT5H-209ENST00000596208 323 ntTSL 24.9□□□□□ -1.622e-6■□□□□ 10
PRPF8Q6P2Q9 SEPT10-211ENST00000468616 531 ntTSL 43.1□□□□□ -1.912e-6■□□□□ 10
PRPF8Q6P2Q9 HP1BP3-211ENST00000443615 557 ntTSL 317.48■□□□□ 0.394e-6■□□□□ 10
PRPF8Q6P2Q9 HP1BP3-206ENST00000419490 538 ntTSL 416.17■□□□□ 0.188e-7■□□□□ 10
PRPF8Q6P2Q9 HP1BP3-204ENST00000414993 727 ntTSL 413.9□□□□□ -0.188e-7■□□□□ 10
PRPF8Q6P2Q9 TRIO-211ENST00000508343 776 ntTSL 212.74□□□□□ -0.372e-6■□□□□ 10
PRPF8Q6P2Q9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.51■□□□□ 0.555e-9■□□□□ 10
PRPF8Q6P2Q9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.92■□□□□ 0.465e-9■□□□□ 10
PRPF8Q6P2Q9 PTP4A2-214ENST00000532289 610 ntTSL 317.87■□□□□ 0.455e-9■□□□□ 10
PRPF8Q6P2Q9 ZFYVE28-205ENST00000508184 541 ntTSL 414.01□□□□□ -0.175e-9■□□□□ 10
PRPF8Q6P2Q9 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.315e-9■□□□□ 10
PRPF8Q6P2Q9 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.99□□□□□ -0.335e-9■□□□□ 10
PRPF8Q6P2Q9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.465e-9■□□□□ 10
PRPF8Q6P2Q9 ZFYVE28-203ENST00000504743 576 ntTSL 411.87□□□□□ -0.515e-9■□□□□ 10
PRPF8Q6P2Q9 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.685e-9■□□□□ 10
PRPF8Q6P2Q9 PTP4A2-211ENST00000528840 456 ntTSL 29.84□□□□□ -0.835e-9■□□□□ 10
PRPF8Q6P2Q9 PTP4A2-216ENST00000534796 900 ntTSL 39.19□□□□□ -0.945e-9■□□□□ 10
PRPF8Q6P2Q9 PTP4A2-204ENST00000475464 366 ntTSL 39.02□□□□□ -0.975e-9■□□□□ 10
PRPF8Q6P2Q9 PTP4A2-208ENST00000524384 663 ntTSL 57.63□□□□□ -1.195e-9■□□□□ 10
PRPF8Q6P2Q9 ABCA7-207ENST00000525238 1100 ntTSL 1 (best)16.61■□□□□ 0.254e-9■□□□□ 10
PRPF8Q6P2Q9 ABCA7-205ENST00000524850 576 ntTSL 415.11■□□□□ 0.014e-9■□□□□ 10
PRPF8Q6P2Q9 CPNE7-209ENST00000568977 682 ntTSL 516.08■□□□□ 0.161e-6■□□□□ 10
PRPF8Q6P2Q9 CPNE7-208ENST00000566398 672 ntTSL 316.07■□□□□ 0.161e-6■□□□□ 10
PRPF8Q6P2Q9 SORD-203ENST00000558580 1395 ntTSL 5 BASIC8.44□□□□□ -1.064e-9■□□□□ 10
PRPF8Q6P2Q9 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.64■□□□□ 0.424e-8■□□□□ 10
PRPF8Q6P2Q9 NAGK-228ENST00000533981 776 ntTSL 315.5■□□□□ 0.078e-7■□□□□ 10
PRPF8Q6P2Q9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.31■□□□□ 0.044e-8■□□□□ 10
PRPF8Q6P2Q9 PPP6R3-212ENST00000526593 570 ntTSL 412.61□□□□□ -0.395e-8■□□□□ 10
PRPF8Q6P2Q9 NAGK-210ENST00000465105 581 ntTSL 211.92□□□□□ -0.58e-7■□□□□ 10
PRPF8Q6P2Q9 FARP2-219ENST00000486736 578 ntTSL 310.87□□□□□ -0.674e-8■□□□□ 10
PRPF8Q6P2Q9 NAGK-216ENST00000480411 546 ntTSL 29.89□□□□□ -0.838e-7■□□□□ 10
PRPF8Q6P2Q9 GTF2IP1-208ENST00000621948 2844 ntTSL 27.14□□□□□ -1.274e-8■□□□□ 10
PRPF8Q6P2Q9 GTF2IP1-205ENST00000618412 2990 ntTSL 2 BASIC7.1□□□□□ -1.274e-8■□□□□ 10
PRPF8Q6P2Q9 GTF2IP1-202ENST00000614592 2047 ntBASIC6.26□□□□□ -1.414e-8■□□□□ 10
PRPF8Q6P2Q9 UBR4-215ENST00000492606 314 ntTSL 34.65□□□□□ -1.664e-8■□□□□ 10
PRPF8Q6P2Q9 MTUS1-227ENST00000524371 564 ntTSL 44.1□□□□□ -1.751e-13■□□□□ 10
PRPF8Q6P2Q9 MTUS1-218ENST00000521635 546 ntTSL 42.94□□□□□ -1.941e-13■□□□□ 10
PRPF8Q6P2Q9 MTUS1-207ENST00000517818 578 ntTSL 40.98□□□□□ -2.251e-13■□□□□ 10
PRPF8Q6P2Q9 PAH-208ENST00000549247 961 ntTSL 25.2□□□□□ -1.583e-9■□□□□ 10
PRPF8Q6P2Q9 IFFO1-207ENST00000471408 2843 ntTSL 210.73□□□□□ -0.697e-8■□□□□ 10
PRPF8Q6P2Q9 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC10.08□□□□□ -0.87e-8■□□□□ 10
PRPF8Q6P2Q9 IFFO1-205ENST00000436152 3101 ntTSL 2 BASIC8.98□□□□□ -0.977e-8■□□□□ 10
PRPF8Q6P2Q9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.354e-9■□□□□ 10
PRPF8Q6P2Q9 INTS11-238ENST00000530233 595 ntTSL 413.21□□□□□ -0.291e-13■□□□□ 10
PRPF8Q6P2Q9 RECQL5-206ENST00000578201 1972 ntTSL 512.17□□□□□ -0.465e-10■□□□□ 10
PRPF8Q6P2Q9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.13□□□□□ -0.475e-10■□□□□ 10
PRPF8Q6P2Q9 OBSL1-206ENST00000462385 951 ntTSL 211.89□□□□□ -0.511e-13■□□□□ 10
PRPF8Q6P2Q9 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC10.9□□□□□ -0.675e-10■□□□□ 10
PRPF8Q6P2Q9 RBPMS-208ENST00000519657 1005 ntTSL 210.3□□□□□ -0.767e-7■□□□□ 10
PRPF8Q6P2Q9 RBPMS-218ENST00000523104 453 ntTSL 39.16□□□□□ -0.947e-7■□□□□ 10
PRPF8Q6P2Q9 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC6.33□□□□□ -1.45e-10■□□□□ 10
PRPF8Q6P2Q9 COQ9-216ENST00000569980 1118 ntTSL 26.05□□□□□ -1.442e-9■□□□□ 10
PRPF8Q6P2Q9 RBPMS-213ENST00000521370 645 ntTSL 35.91□□□□□ -1.467e-7■□□□□ 10
PRPF8Q6P2Q9 ADCY7-206ENST00000564044 575 ntTSL 313.72□□□□□ -0.213e-7■□□□□ 10
PRPF8Q6P2Q9 ADCY7-205ENST00000563677 557 ntTSL 47.88□□□□□ -1.153e-7■□□□□ 10
PRPF8Q6P2Q9 C9orf3-212ENST00000468164 849 ntTSL 511.65□□□□□ -0.543e-7■□□□□ 10
PRPF8Q6P2Q9 C9orf3-221ENST00000489562 646 ntTSL 211.52□□□□□ -0.573e-7■□□□□ 10
PRPF8Q6P2Q9 DDB2-212ENST00000617022 2181 ntTSL 212.78□□□□□ -0.361e-7■□□□□ 10
PRPF8Q6P2Q9 DDB2-203ENST00000378601 1591 ntTSL 211.24□□□□□ -0.611e-7■□□□□ 10
PRPF8Q6P2Q9 DDB2-213ENST00000617847 1649 ntTSL 510.56□□□□□ -0.721e-7■□□□□ 10
PRPF8Q6P2Q9 DDB2-201ENST00000256996 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.841e-7■□□□□ 10
PRPF8Q6P2Q9 DDB2-206ENST00000612309 3101 ntTSL 26.28□□□□□ -1.41e-7■□□□□ 10
PRPF8Q6P2Q9 MYO9B-210ENST00000597572 660 ntTSL 514.36□□□□□ -0.112e-8■□□□□ 10
PRPF8Q6P2Q9 GSN-201ENST00000373806 879 ntTSL 216.07■□□□□ 0.162e-13■□□□□ 10
PRPF8Q6P2Q9 GSN-211ENST00000477553 680 ntTSL 210.58□□□□□ -0.722e-13■□□□□ 10
PRPF8Q6P2Q9 APOM-201ENST00000375916 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.12e-8■□□□□ 9.9
PRPF8Q6P2Q9 APOM-203ENST00000375920 709 ntTSL 1 (best) BASIC8.18□□□□□ -1.12e-8■□□□□ 9.9
PRPF8Q6P2Q9 APOM-202ENST00000375918 922 ntTSL 2 BASIC7.61□□□□□ -1.192e-8■□□□□ 9.9
PRPF8Q6P2Q9 HNRNPL-209ENST00000600741 624 ntTSL 211.27□□□□□ -0.61e-8■□□□□ 9.9
PRPF8Q6P2Q9 ZFAND2A-204ENST00000471448 542 ntTSL 28.1□□□□□ -1.113e-8■□□□□ 9.9
PRPF8Q6P2Q9 ZFAND2A-207ENST00000574135 433 ntTSL 36.89□□□□□ -1.313e-8■□□□□ 9.9
PRPF8Q6P2Q9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.73□□□□□ -0.051e-10■□□□□ 9.9
PRPF8Q6P2Q9 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC2.77□□□□□ -1.975e-7■□□□□ 9.9
PRPF8Q6P2Q9 MRPS36-202ENST00000503793 288 ntTSL 216■□□□□ 0.154e-12■□□□□ 9.9
PRPF8Q6P2Q9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.08□□□□□ -0.484e-12■□□□□ 9.9
PRPF8Q6P2Q9 EEF1D-227ENST00000529576 424 ntTSL 213.87□□□□□ -0.191e-7■□□□□ 9.9
PRPF8Q6P2Q9 SLC22A23-206ENST00000467144 542 ntTSL 411.66□□□□□ -0.542e-18■□□□□ 9.9
PRPF8Q6P2Q9 SLC22A23-211ENST00000496753 561 ntTSL 410.27□□□□□ -0.772e-18■□□□□ 9.9
PRPF8Q6P2Q9 SPON2-217ENST00000512150 505 ntTSL 414.54□□□□□ -0.082e-7■□□□□ 9.9
PRPF8Q6P2Q9 PKD1P6-206ENST00000546358 579 ntTSL 313.54□□□□□ -0.242e-8■□□□□ 9.9
PRPF8Q6P2Q9 PKD1P6-204ENST00000540075 656 ntTSL 213.04□□□□□ -0.322e-8■□□□□ 9.9
PRPF8Q6P2Q9 PROC-206ENST00000429925 581 ntTSL 311.78□□□□□ -0.524e-18■□□□□ 9.9
PRPF8Q6P2Q9 PROC-210ENST00000474030 501 ntTSL 49.01□□□□□ -0.974e-18■□□□□ 9.9
PRPF8Q6P2Q9 LPIN1-203ENST00000396098 1761 ntTSL 1 (best) BASIC9.11□□□□□ -0.953e-9■□□□□ 9.9
PRPF8Q6P2Q9 LPIN1-211ENST00000460096 629 ntTSL 1 (best)7.33□□□□□ -1.243e-9■□□□□ 9.9
PRPF8Q6P2Q9 FAM3C-203ENST00000426156 662 ntTSL 523.32■■□□□ 1.325e-6■□□□□ 9.9
PRPF8Q6P2Q9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.67■□□□□ 0.425e-6■□□□□ 9.9
PRPF8Q6P2Q9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.365e-6■□□□□ 9.9
PRPF8Q6P2Q9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.01■□□□□ 0.315e-6■□□□□ 9.9
PRPF8Q6P2Q9 CHD3-204ENST00000439235 1263 ntTSL 516.74■□□□□ 0.275e-6■□□□□ 9.9
PRPF8Q6P2Q9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.44■□□□□ 0.225e-6■□□□□ 9.9
PRPF8Q6P2Q9 STK25-223ENST00000470438 515 ntTSL 516.07■□□□□ 0.165e-13■□□□□ 9.9
PRPF8Q6P2Q9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.125e-6■□□□□ 9.9
PRPF8Q6P2Q9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.52■□□□□ 0.085e-6■□□□□ 9.9
PRPF8Q6P2Q9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.07■□□□□ 05e-6■□□□□ 9.9
PRPF8Q6P2Q9 CAPN12-207ENST00000597716 2198 ntTSL 215.05■□□□□ -05e-6■□□□□ 9.9
PRPF8Q6P2Q9 TFR2-210ENST00000474947 1514 ntTSL 215.01□□□□□ -0.015e-6■□□□□ 9.9
PRPF8Q6P2Q9 ZNF436-AS1-204ENST00000458053 375 ntTSL 214.94□□□□□ -0.025e-6■□□□□ 9.9
Retrieved 100 of 73,762 protein–RNA pairs in 525.3 ms