Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC126323.4-201ENST00000566935 234 ntBASIC6.31□□□□□ -1.4
SSX4O60224 RN7SL835P-201ENST00000579920 262 ntBASIC6.31□□□□□ -1.4
SSX4O60224 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX4O60224 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX4O60224 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 RN7SL680P-201ENST00000620379 299 ntBASIC6.31□□□□□ -1.4
SSX4O60224 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SSX4O60224 JAML-213ENST00000640745 951 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX4O60224 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 AC061975.5-201ENST00000584928 1441 ntBASIC6.31□□□□□ -1.4
SSX4O60224 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX4O60224 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX4O60224 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
SSX4O60224 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX4O60224 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SSX4O60224 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSX4O60224 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX4O60224 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX4O60224 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSX4O60224 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSX4O60224 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SSX4O60224 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX4O60224 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX4O60224 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SSX4O60224 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSX4O60224 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.3□□□□□ -1.4
SSX4O60224 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX4O60224 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX4O60224 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX4O60224 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SSX4O60224 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SSX4O60224 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX4O60224 RPS20P25-201ENST00000412447 352 ntBASIC6.3□□□□□ -1.4
SSX4O60224 RPS21P8-201ENST00000413365 247 ntBASIC6.3□□□□□ -1.4
SSX4O60224 AC020983.1-201ENST00000417063 543 ntBASIC6.3□□□□□ -1.4
SSX4O60224 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX4O60224 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX4O60224 GAPDHP69-201ENST00000425504 1008 ntBASIC6.3□□□□□ -1.4
SSX4O60224 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.3□□□□□ -1.4
SSX4O60224 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX4O60224 RNU6-775P-201ENST00000459318 96 ntBASIC6.3□□□□□ -1.4
SSX4O60224 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX4O60224 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX4O60224 AC114940.1-201ENST00000512162 1265 ntBASIC6.3□□□□□ -1.4
SSX4O60224 RNA5SP116-201ENST00000516132 98 ntBASIC6.3□□□□□ -1.4
SSX4O60224 OR5M4P-201ENST00000529436 925 ntBASIC6.3□□□□□ -1.4
SSX4O60224 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SSX4O60224 PHBP2-201ENST00000532859 806 ntBASIC6.3□□□□□ -1.4
SSX4O60224 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX4O60224 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX4O60224 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX4O60224 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX4O60224 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX4O60224 MIR6070-201ENST00000613967 103 ntBASIC6.3□□□□□ -1.4
SSX4O60224 AC048341.3-201ENST00000619323 491 ntBASIC6.3□□□□□ -1.4
SSX4O60224 AC091059.2-201ENST00000623355 614 ntBASIC6.3□□□□□ -1.4
SSX4O60224 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX4O60224 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.3□□□□□ -1.4
SSX4O60224 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX4O60224 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX4O60224 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSX4O60224 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSX4O60224 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX4O60224 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX4O60224 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SSX4O60224 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX4O60224 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.3□□□□□ -1.4
SSX4O60224 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.3□□□□□ -1.4
SSX4O60224 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX4O60224 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SSX4O60224 CR383656.5-201ENST00000547616 1340 ntBASIC6.29□□□□□ -1.4
SSX4O60224 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.29□□□□□ -1.4
SSX4O60224 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSX4O60224 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.29□□□□□ -1.4
SSX4O60224 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.29□□□□□ -1.4
SSX4O60224 AC090771.1-201ENST00000585803 1618 ntBASIC6.29□□□□□ -1.4
SSX4O60224 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.29□□□□□ -1.4
SSX4O60224 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.29□□□□□ -1.4
SSX4O60224 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.29□□□□□ -1.4
SSX4O60224 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSX4O60224 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SSX4O60224 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
SSX4O60224 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSX4O60224 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSX4O60224 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SSX4O60224 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SSX4O60224 MIR498-201ENST00000385134 124 ntBASIC6.29□□□□□ -1.4
SSX4O60224 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms