Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 USP3-201ENST00000268049 5311 ntTSL 5 BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 TATDN2P3-201ENST00000452855 3665 ntBASIC10.39□□□□□ -0.75
VPS8Q8N3P4 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 RNA5SP512-201ENST00000364550 120 ntBASIC10.39□□□□□ -0.75
VPS8Q8N3P4 AL049697.3-201ENST00000406493 982 ntBASIC10.39□□□□□ -0.75
VPS8Q8N3P4 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 CYCSP52-201ENST00000422857 310 ntBASIC10.39□□□□□ -0.75
VPS8Q8N3P4 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 AC083906.1-201ENST00000509298 406 ntBASIC10.39□□□□□ -0.75
VPS8Q8N3P4 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 AC092718.4-201ENST00000566639 716 ntBASIC10.39□□□□□ -0.75
VPS8Q8N3P4 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 MIR4732-201ENST00000581873 76 ntBASIC10.39□□□□□ -0.75
VPS8Q8N3P4 BUB1P1-201ENST00000603541 607 ntBASIC10.39□□□□□ -0.75
VPS8Q8N3P4 AL359704.2-201ENST00000604335 521 ntBASIC10.39□□□□□ -0.75
VPS8Q8N3P4 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
VPS8Q8N3P4 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 NEK2P2-201ENST00000438441 1338 ntBASIC10.38□□□□□ -0.75
VPS8Q8N3P4 EEF1A1P12-201ENST00000443590 1346 ntBASIC10.38□□□□□ -0.75
VPS8Q8N3P4 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 AC005702.3-201ENST00000585345 1447 ntBASIC10.38□□□□□ -0.75
VPS8Q8N3P4 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 MIR191-201ENST00000384873 92 ntBASIC10.38□□□□□ -0.75
VPS8Q8N3P4 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 AC011500.1-201ENST00000601963 469 ntBASIC10.38□□□□□ -0.75
VPS8Q8N3P4 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 MAPK10-344ENST00000641718 3746 ntBASIC10.38□□□□□ -0.75
VPS8Q8N3P4 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 MTHFD1P1-201ENST00000413059 2764 ntBASIC10.38□□□□□ -0.75
VPS8Q8N3P4 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC10.38□□□□□ -0.75
VPS8Q8N3P4 AC005839.1-201ENST00000624148 3213 ntBASIC10.38□□□□□ -0.75
VPS8Q8N3P4 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 AL596244.1-201ENST00000567068 3779 ntBASIC10.37□□□□□ -0.75
VPS8Q8N3P4 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 AC020978.8-201ENST00000571975 3022 ntBASIC10.37□□□□□ -0.75
VPS8Q8N3P4 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 RBMY2HP-201ENST00000457961 720 ntBASIC10.37□□□□□ -0.75
VPS8Q8N3P4 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 IGHV3-57-201ENST00000520143 280 ntBASIC10.37□□□□□ -0.75
VPS8Q8N3P4 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 MT1CP-201ENST00000567054 174 ntBASIC10.37□□□□□ -0.75
VPS8Q8N3P4 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 uc_338.29-201ENST00000615099 168 ntBASIC10.37□□□□□ -0.75
VPS8Q8N3P4 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
VPS8Q8N3P4 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS8Q8N3P4 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
VPS8Q8N3P4 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
VPS8Q8N3P4 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
VPS8Q8N3P4 RBMY3AP-201ENST00000449381 1145 ntBASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms