Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CD40P25942 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CD40P25942 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC6.54□□□□□ -1.36
CD40P25942 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CD40P25942 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 MFSD8-213ENST00000641134 1327 ntBASIC6.54□□□□□ -1.36
CD40P25942 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC6.54□□□□□ -1.36
CD40P25942 PTBP3-203ENST00000343327 2755 ntTSL 2 BASIC6.54□□□□□ -1.36
CD40P25942 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
CD40P25942 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CD40P25942 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 HSPD1P11-201ENST00000508643 1702 ntBASIC6.54□□□□□ -1.36
CD40P25942 SOCS5P5-201ENST00000402732 1586 ntBASIC6.54□□□□□ -1.36
CD40P25942 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CD40P25942 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 NTRK3-201ENST00000317501 3826 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CD40P25942 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 CEP41-203ENST00000343969 1087 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 SNORD56.4-201ENST00000363883 71 ntBASIC6.54□□□□□ -1.36
CD40P25942 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 RPL12P1-201ENST00000374520 498 ntBASIC6.54□□□□□ -1.36
CD40P25942 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CD40P25942 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 SNORA2C-201ENST00000408564 137 ntBASIC6.54□□□□□ -1.36
CD40P25942 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.54□□□□□ -1.36
CD40P25942 PPIAP30-201ENST00000415473 519 ntBASIC6.54□□□□□ -1.36
CD40P25942 LIPT1P1-201ENST00000415870 1186 ntBASIC6.54□□□□□ -1.36
CD40P25942 AL449283.1-202ENST00000418249 604 ntBASIC6.54□□□□□ -1.36
CD40P25942 AC231533.2-201ENST00000419045 978 ntBASIC6.54□□□□□ -1.36
CD40P25942 AL365338.1-201ENST00000422282 858 ntBASIC6.54□□□□□ -1.36
CD40P25942 PNRC2P1-201ENST00000423940 420 ntBASIC6.54□□□□□ -1.36
CD40P25942 RPL6P2-201ENST00000425480 783 ntBASIC6.54□□□□□ -1.36
CD40P25942 VN1R35P-201ENST00000428102 693 ntBASIC6.54□□□□□ -1.36
CD40P25942 RPL7P34-201ENST00000433316 712 ntBASIC6.54□□□□□ -1.36
CD40P25942 NQO1-204ENST00000439109 924 ntTSL 2 BASIC6.54□□□□□ -1.36
CD40P25942 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC6.54□□□□□ -1.36
CD40P25942 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.54□□□□□ -1.36
CD40P25942 AL353803.3-201ENST00000444641 335 ntBASIC6.54□□□□□ -1.36
CD40P25942 Z83846.1-201ENST00000446798 265 ntBASIC6.54□□□□□ -1.36
CD40P25942 CDC42P2-201ENST00000448566 569 ntBASIC6.54□□□□□ -1.36
CD40P25942 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
CD40P25942 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.54□□□□□ -1.36
CD40P25942 CREM-220ENST00000463314 964 ntTSL 2 BASIC6.54□□□□□ -1.36
CD40P25942 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC6.54□□□□□ -1.36
CD40P25942 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.54□□□□□ -1.36
CD40P25942 SCARNA20.1-201ENST00000516009 138 ntBASIC6.54□□□□□ -1.36
CD40P25942 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.54□□□□□ -1.36
CD40P25942 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.54□□□□□ -1.36
CD40P25942 AP001994.1-201ENST00000527539 826 ntBASIC6.54□□□□□ -1.36
CD40P25942 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
CD40P25942 AC018523.1-201ENST00000534211 512 ntBASIC6.54□□□□□ -1.36
CD40P25942 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.54□□□□□ -1.36
CD40P25942 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC6.54□□□□□ -1.36
CD40P25942 ZNF971P-201ENST00000562068 1249 ntBASIC6.54□□□□□ -1.36
CD40P25942 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC6.54□□□□□ -1.36
CD40P25942 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.54□□□□□ -1.36
CD40P25942 AL390058.1-201ENST00000603834 629 ntBASIC6.54□□□□□ -1.36
CD40P25942 AC067838.1-201ENST00000606064 577 ntBASIC6.54□□□□□ -1.36
CD40P25942 AC016405.2-201ENST00000607393 312 ntBASIC6.54□□□□□ -1.36
CD40P25942 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.54□□□□□ -1.36
CD40P25942 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.54□□□□□ -1.36
CD40P25942 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.54□□□□□ -1.36
CD40P25942 AC021755.4-201ENST00000616620 456 ntBASIC6.54□□□□□ -1.36
CD40P25942 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC6.54□□□□□ -1.36
CD40P25942 AC105105.5-201ENST00000622635 1294 ntBASIC6.54□□□□□ -1.36
CD40P25942 AC073488.8-201ENST00000631952 757 ntBASIC6.54□□□□□ -1.36
CD40P25942 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CD40P25942 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.54□□□□□ -1.36
CD40P25942 AL353763.2-201ENST00000623489 1903 ntBASIC6.54□□□□□ -1.36
CD40P25942 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
CD40P25942 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC6.54□□□□□ -1.36
CD40P25942 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.54□□□□□ -1.36
CD40P25942 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.54□□□□□ -1.36
CD40P25942 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CD40P25942 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CD40P25942 SF3A3P1-201ENST00000446317 1477 ntBASIC6.53□□□□□ -1.36
CD40P25942 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.53□□□□□ -1.36
CD40P25942 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC6.53□□□□□ -1.36
CD40P25942 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC6.53□□□□□ -1.36
CD40P25942 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC6.53□□□□□ -1.36
CD40P25942 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CD40P25942 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CD40P25942 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms