Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 AP000864.1-201ENST00000609424 650 ntBASIC6.38□□□□□ -1.39
CHD8Q9HCK8 MIR6811-201ENST00000620409 58 ntBASIC6.38□□□□□ -1.39
CHD8Q9HCK8 AP001264.1-201ENST00000620602 703 ntBASIC6.38□□□□□ -1.39
CHD8Q9HCK8 AP003469.4-201ENST00000565617 2825 ntBASIC6.38□□□□□ -1.39
CHD8Q9HCK8 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 GRM7-204ENST00000402647 2034 ntTSL 5 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 AC108451.1-201ENST00000558208 2520 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 SPATA31C2-201ENST00000324915 3777 ntBASIC6.38□□□□□ -1.39
CHD8Q9HCK8 TEX11-203ENST00000374333 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 KIRREL1-203ENST00000368172 6870 ntTSL 2 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 ANKEF1-202ENST00000378392 2894 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 SNORA70-201ENST00000384436 135 ntBASIC6.38□□□□□ -1.39
CHD8Q9HCK8 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 CDY8P-201ENST00000428380 1279 ntBASIC6.38□□□□□ -1.39
CHD8Q9HCK8 GTF3AP6-201ENST00000432585 986 ntBASIC6.38□□□□□ -1.39
CHD8Q9HCK8 CDY20P-201ENST00000447528 1279 ntBASIC6.38□□□□□ -1.39
CHD8Q9HCK8 PSPC1P2-201ENST00000455130 225 ntBASIC6.38□□□□□ -1.39
CHD8Q9HCK8 RN7SL727P-201ENST00000482164 296 ntBASIC6.38□□□□□ -1.39
CHD8Q9HCK8 OR5M14P-201ENST00000506803 618 ntBASIC6.38□□□□□ -1.39
CHD8Q9HCK8 ATP5LP3-201ENST00000514223 304 ntBASIC6.38□□□□□ -1.39
CHD8Q9HCK8 AC112191.2-201ENST00000522428 333 ntBASIC6.38□□□□□ -1.39
CHD8Q9HCK8 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 RPL3P13-201ENST00000550415 216 ntBASIC6.38□□□□□ -1.39
CHD8Q9HCK8 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 PLAC4-201ENST00000623119 5588 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 SYNJ1-211ENST00000630077 6898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 SLC6A4-201ENST00000261707 6604 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CHD8Q9HCK8 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 MAPK10-329ENST00000641555 2656 ntBASIC6.37□□□□□ -1.39
CHD8Q9HCK8 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 RN7SKP279-201ENST00000411383 298 ntBASIC6.37□□□□□ -1.39
CHD8Q9HCK8 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 AL590128.1-201ENST00000433407 286 ntBASIC6.37□□□□□ -1.39
CHD8Q9HCK8 AL645568.1-202ENST00000437190 1016 ntTSL 5 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 OR2L9P-201ENST00000444456 913 ntBASIC6.37□□□□□ -1.39
CHD8Q9HCK8 AC108103.1-201ENST00000511286 446 ntBASIC6.37□□□□□ -1.39
CHD8Q9HCK8 AC036111.2-201ENST00000533247 901 ntBASIC6.37□□□□□ -1.39
CHD8Q9HCK8 AL008726.1-201ENST00000607703 569 ntTSL 4 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 GPR82-201ENST00000302548 3349 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 ZNF806-201ENST00000438300 1774 ntBASIC6.37□□□□□ -1.39
CHD8Q9HCK8 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 TAF1L-201ENST00000242310 6216 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 DEFA9P-201ENST00000433042 285 ntBASIC6.37□□□□□ -1.39
CHD8Q9HCK8 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 UBFD1P1-201ENST00000473259 814 ntBASIC6.37□□□□□ -1.39
CHD8Q9HCK8 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 AC022296.2-201ENST00000512424 202 ntBASIC6.37□□□□□ -1.39
CHD8Q9HCK8 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 MIR4437-201ENST00000581331 60 ntBASIC6.37□□□□□ -1.39
CHD8Q9HCK8 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.37□□□□□ -1.39
CHD8Q9HCK8 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC6.37□□□□□ -1.39
CHD8Q9HCK8 AC005702.3-201ENST00000585345 1447 ntBASIC6.37□□□□□ -1.39
CHD8Q9HCK8 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.36□□□□□ -1.39
CHD8Q9HCK8 RPS10P21-201ENST00000430654 475 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms