Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 PCDHAC2-203ENST00000615316 3011 ntBASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 AC098590.1-201ENST00000468126 897 ntBASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 AC105020.6-201ENST00000621523 1217 ntBASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 AC006128.1-201ENST00000624704 1661 ntBASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGB6Q9Y5F9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 PGM5P4-201ENST00000421970 445 ntBASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHGB6Q9Y5F9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGB6Q9Y5F9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGB6Q9Y5F9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.77■□□□□ 0.59
PCDHGB6Q9Y5F9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.77■□□□□ 0.59
PCDHGB6Q9Y5F9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 PNMA6B-201ENST00000538162 1200 ntBASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCDHGB6Q9Y5F9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGB6Q9Y5F9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGB6Q9Y5F9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms