Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 KRT8P36-201ENST00000489121 1440 ntBASIC18.82■□□□□ 0.6
AP4S1Q9Y587 HCG11-201ENST00000411553 5696 ntBASIC18.81■□□□□ 0.6
AP4S1Q9Y587 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
AP4S1Q9Y587 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP4S1Q9Y587 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.81■□□□□ 0.6
AP4S1Q9Y587 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AP4S1Q9Y587 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP4S1Q9Y587 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.81■□□□□ 0.6
AP4S1Q9Y587 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
AP4S1Q9Y587 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP4S1Q9Y587 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.81■□□□□ 0.6
AP4S1Q9Y587 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.81■□□□□ 0.6
AP4S1Q9Y587 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP4S1Q9Y587 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
AP4S1Q9Y587 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AP4S1Q9Y587 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP4S1Q9Y587 AIRN-201ENST00000601203 4374 ntBASIC18.81■□□□□ 0.6
AP4S1Q9Y587 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
AP4S1Q9Y587 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP4S1Q9Y587 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP4S1Q9Y587 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 RARRES2P1-201ENST00000474487 481 ntBASIC18.8■□□□□ 0.6
AP4S1Q9Y587 IGHV3-19-201ENST00000521488 291 ntBASIC18.8■□□□□ 0.6
AP4S1Q9Y587 AC105233.4-201ENST00000642045 216 ntBASIC18.8■□□□□ 0.6
AP4S1Q9Y587 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
AP4S1Q9Y587 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
AP4S1Q9Y587 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.79■□□□□ 0.6
AP4S1Q9Y587 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
AP4S1Q9Y587 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
AP4S1Q9Y587 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP4S1Q9Y587 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP4S1Q9Y587 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP4S1Q9Y587 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
AP4S1Q9Y587 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP4S1Q9Y587 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP4S1Q9Y587 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.79■□□□□ 0.6
AP4S1Q9Y587 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP4S1Q9Y587 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.79■□□□□ 0.6
AP4S1Q9Y587 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP4S1Q9Y587 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP4S1Q9Y587 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
AP4S1Q9Y587 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP4S1Q9Y587 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP4S1Q9Y587 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP4S1Q9Y587 AL049812.1-201ENST00000432563 2267 ntBASIC18.79■□□□□ 0.6
AP4S1Q9Y587 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.78■□□□□ 0.6
AP4S1Q9Y587 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 AC126544.1-201ENST00000580842 1059 ntBASIC18.78■□□□□ 0.6
AP4S1Q9Y587 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.78■□□□□ 0.6
AP4S1Q9Y587 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.77■□□□□ 0.6
AP4S1Q9Y587 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms