Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 AC097381.1-201ENST00000429019 1296 ntBASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 AC009237.14-201ENST00000609975 1594 ntBASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
UBE2D4Q9Y2X8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 AC027612.3-201ENST00000413684 1047 ntBASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 SUDS3P1-201ENST00000505831 966 ntBASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 SLC7A5P1-201ENST00000568957 537 ntBASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC13.85□□□□□ -0.19
UBE2D4Q9Y2X8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 LINC02228-203ENST00000641970 1355 ntBASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 AL356652.1-201ENST00000615962 565 ntBASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.84□□□□□ -0.19
UBE2D4Q9Y2X8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC13.83□□□□□ -0.19
UBE2D4Q9Y2X8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBE2D4Q9Y2X8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBE2D4Q9Y2X8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBE2D4Q9Y2X8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
UBE2D4Q9Y2X8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms