Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGB4Q9UN71 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
PCDHGB4Q9UN71 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.27■□□□□ 0.67
PCDHGB4Q9UN71 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 RBM17P2-201ENST00000616397 1405 ntBASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGB4Q9UN71 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 CDV3P1-201ENST00000471403 739 ntBASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGB4Q9UN71 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 TCF3P1-201ENST00000423021 1937 ntBASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 AC091799.1-201ENST00000422823 811 ntBASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 FAM21FP-204ENST00000608637 956 ntBASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGB4Q9UN71 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGB4Q9UN71 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms