Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 AC007225.1-201ENST00000566331 1836 ntBASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 AC009299.2-201ENST00000482477 511 ntBASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 FP325331.1-202ENST00000623531 1380 ntBASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PRDM4Q9UKN5 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PRDM4Q9UKN5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 AC090164.3-201ENST00000610780 2143 ntBASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 AC239859.2-201ENST00000444165 318 ntBASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 LINC00554-201ENST00000564841 3011 ntBASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRDM4Q9UKN5 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRDM4Q9UKN5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
PRDM4Q9UKN5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
PRDM4Q9UKN5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM4Q9UKN5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM4Q9UKN5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM4Q9UKN5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
PRDM4Q9UKN5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.51■□□□□ 0.87
PRDM4Q9UKN5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM4Q9UKN5 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM4Q9UKN5 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM4Q9UKN5 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PRDM4Q9UKN5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRDM4Q9UKN5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PRDM4Q9UKN5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms