Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SALL4Q9UJQ4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.18■□□□□ 0.98
SALL4Q9UJQ4 KRT18P11-201ENST00000435214 1283 ntBASIC21.18■□□□□ 0.98
SALL4Q9UJQ4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
SALL4Q9UJQ4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.18■□□□□ 0.98
SALL4Q9UJQ4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SALL4Q9UJQ4 AL591742.1-201ENST00000604433 565 ntBASIC21.18■□□□□ 0.98
SALL4Q9UJQ4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.18■□□□□ 0.98
SALL4Q9UJQ4 AC010536.3-201ENST00000620306 533 ntBASIC21.18■□□□□ 0.98
SALL4Q9UJQ4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.18■□□□□ 0.98
SALL4Q9UJQ4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SALL4Q9UJQ4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SALL4Q9UJQ4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SALL4Q9UJQ4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SALL4Q9UJQ4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SALL4Q9UJQ4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SALL4Q9UJQ4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SALL4Q9UJQ4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 HLA-L-209ENST00000420110 1011 ntBASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 AC026185.1-201ENST00000445748 174 ntBASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 AC009237.14-201ENST00000609975 1594 ntBASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SALL4Q9UJQ4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SALL4Q9UJQ4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SALL4Q9UJQ4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SALL4Q9UJQ4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SALL4Q9UJQ4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SALL4Q9UJQ4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SALL4Q9UJQ4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.16■□□□□ 0.98
SALL4Q9UJQ4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.16■□□□□ 0.98
SALL4Q9UJQ4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SALL4Q9UJQ4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.16■□□□□ 0.98
SALL4Q9UJQ4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.16■□□□□ 0.98
SALL4Q9UJQ4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.16■□□□□ 0.98
SALL4Q9UJQ4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SALL4Q9UJQ4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SALL4Q9UJQ4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.16■□□□□ 0.98
SALL4Q9UJQ4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SALL4Q9UJQ4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 Z82202.1-201ENST00000623446 1880 ntBASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SALL4Q9UJQ4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.14■□□□□ 0.98
SALL4Q9UJQ4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.14■□□□□ 0.98
SALL4Q9UJQ4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SALL4Q9UJQ4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SALL4Q9UJQ4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.14■□□□□ 0.97
SALL4Q9UJQ4 PGM5P4-201ENST00000421970 445 ntBASIC21.14■□□□□ 0.97
SALL4Q9UJQ4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SALL4Q9UJQ4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.14■□□□□ 0.97
SALL4Q9UJQ4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SALL4Q9UJQ4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
SALL4Q9UJQ4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.14■□□□□ 0.97
SALL4Q9UJQ4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.14■□□□□ 0.97
SALL4Q9UJQ4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.14■□□□□ 0.97
SALL4Q9UJQ4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SALL4Q9UJQ4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SALL4Q9UJQ4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SALL4Q9UJQ4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SALL4Q9UJQ4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SALL4Q9UJQ4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms