Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RLIMQ9NVW2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.56■□□□□ 0.56
RLIMQ9NVW2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.56■□□□□ 0.56
RLIMQ9NVW2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RLIMQ9NVW2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RLIMQ9NVW2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RLIMQ9NVW2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.56■□□□□ 0.56
RLIMQ9NVW2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.56■□□□□ 0.56
RLIMQ9NVW2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RLIMQ9NVW2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RLIMQ9NVW2 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.56■□□□□ 0.56
RLIMQ9NVW2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RLIMQ9NVW2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RLIMQ9NVW2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RLIMQ9NVW2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.54■□□□□ 0.56
RLIMQ9NVW2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RLIMQ9NVW2 AP000974.1-201ENST00000623909 2387 ntBASIC18.54■□□□□ 0.56
RLIMQ9NVW2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RLIMQ9NVW2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RLIMQ9NVW2 MCRIP2P1-201ENST00000394346 511 ntBASIC18.54■□□□□ 0.56
RLIMQ9NVW2 CYP2T1P-201ENST00000432607 1285 ntBASIC18.54■□□□□ 0.56
RLIMQ9NVW2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RLIMQ9NVW2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.54■□□□□ 0.56
RLIMQ9NVW2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
RLIMQ9NVW2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
RLIMQ9NVW2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RLIMQ9NVW2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RLIMQ9NVW2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
RLIMQ9NVW2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RLIMQ9NVW2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RLIMQ9NVW2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RLIMQ9NVW2 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.54■□□□□ 0.56
RLIMQ9NVW2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RLIMQ9NVW2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RLIMQ9NVW2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 BX323043.1-201ENST00000641006 1765 ntBASIC18.53■□□□□ 0.56
RLIMQ9NVW2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 AC007322.1-201ENST00000426983 750 ntBASIC18.53■□□□□ 0.56
RLIMQ9NVW2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.53■□□□□ 0.56
RLIMQ9NVW2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RLIMQ9NVW2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
RLIMQ9NVW2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.52■□□□□ 0.56
RLIMQ9NVW2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RLIMQ9NVW2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RLIMQ9NVW2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RLIMQ9NVW2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RLIMQ9NVW2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RLIMQ9NVW2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RLIMQ9NVW2 AC004911.1-201ENST00000416316 871 ntBASIC18.52■□□□□ 0.56
RLIMQ9NVW2 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.52■□□□□ 0.56
RLIMQ9NVW2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.52■□□□□ 0.56
RLIMQ9NVW2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.52■□□□□ 0.56
RLIMQ9NVW2 IKBKGP1-201ENST00000612193 1073 ntBASIC18.52■□□□□ 0.56
RLIMQ9NVW2 AC100791.3-201ENST00000617619 330 ntBASIC18.52■□□□□ 0.56
RLIMQ9NVW2 AC231657.2-201ENST00000624556 255 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms