Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
BLOC1S4Q9NUP1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
BLOC1S4Q9NUP1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.21■■□□□ 1.15
BLOC1S4Q9NUP1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
BLOC1S4Q9NUP1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.21■■□□□ 1.15
BLOC1S4Q9NUP1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.21■■□□□ 1.15
BLOC1S4Q9NUP1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
BLOC1S4Q9NUP1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.21■■□□□ 1.15
BLOC1S4Q9NUP1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC22.21■■□□□ 1.15
BLOC1S4Q9NUP1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.21■■□□□ 1.15
BLOC1S4Q9NUP1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC22.21■■□□□ 1.15
BLOC1S4Q9NUP1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
BLOC1S4Q9NUP1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.21■■□□□ 1.15
BLOC1S4Q9NUP1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
BLOC1S4Q9NUP1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC22.21■■□□□ 1.15
BLOC1S4Q9NUP1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
BLOC1S4Q9NUP1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
BLOC1S4Q9NUP1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.2■■□□□ 1.15
BLOC1S4Q9NUP1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.15
BLOC1S4Q9NUP1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
BLOC1S4Q9NUP1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC22.2■■□□□ 1.15
BLOC1S4Q9NUP1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
BLOC1S4Q9NUP1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
BLOC1S4Q9NUP1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
BLOC1S4Q9NUP1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC22.2■■□□□ 1.14
BLOC1S4Q9NUP1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
BLOC1S4Q9NUP1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
BLOC1S4Q9NUP1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.2■■□□□ 1.14
BLOC1S4Q9NUP1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.2■■□□□ 1.14
BLOC1S4Q9NUP1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
BLOC1S4Q9NUP1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC22.2■■□□□ 1.14
BLOC1S4Q9NUP1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.2■■□□□ 1.14
BLOC1S4Q9NUP1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
BLOC1S4Q9NUP1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
BLOC1S4Q9NUP1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.2■■□□□ 1.14
BLOC1S4Q9NUP1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.2■■□□□ 1.14
BLOC1S4Q9NUP1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC22.2■■□□□ 1.14
BLOC1S4Q9NUP1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 AC009237.14-201ENST00000609975 1594 ntBASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 PHGDH-210ENST00000641115 1638 ntBASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
BLOC1S4Q9NUP1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
BLOC1S4Q9NUP1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BLOC1S4Q9NUP1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BLOC1S4Q9NUP1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
BLOC1S4Q9NUP1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
BLOC1S4Q9NUP1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
BLOC1S4Q9NUP1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BLOC1S4Q9NUP1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BLOC1S4Q9NUP1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BLOC1S4Q9NUP1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
BLOC1S4Q9NUP1 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.18■■□□□ 1.14
BLOC1S4Q9NUP1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
BLOC1S4Q9NUP1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.18■■□□□ 1.14
BLOC1S4Q9NUP1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.18■■□□□ 1.14
BLOC1S4Q9NUP1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.18■■□□□ 1.14
BLOC1S4Q9NUP1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.18■■□□□ 1.14
BLOC1S4Q9NUP1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.18■■□□□ 1.14
BLOC1S4Q9NUP1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC22.18■■□□□ 1.14
BLOC1S4Q9NUP1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 AC124283.5-201ENST00000624661 1809 ntBASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 AL390719.1-204ENST00000412397 1219 ntBASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC22.17■■□□□ 1.14
BLOC1S4Q9NUP1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms