Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC52A3Q9NQ40 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC52A3Q9NQ40 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.89■□□□□ 0.62
SLC52A3Q9NQ40 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 AL031963.3-201ENST00000606441 850 ntBASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 AP001271.2-201ENST00000624018 1556 ntBASIC18.89■□□□□ 0.61
SLC52A3Q9NQ40 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC52A3Q9NQ40 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC52A3Q9NQ40 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC52A3Q9NQ40 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC52A3Q9NQ40 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC52A3Q9NQ40 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
SLC52A3Q9NQ40 AC007322.4-201ENST00000509611 723 ntBASIC18.88■□□□□ 0.61
SLC52A3Q9NQ40 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SLC52A3Q9NQ40 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC52A3Q9NQ40 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC52A3Q9NQ40 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC52A3Q9NQ40 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC52A3Q9NQ40 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC52A3Q9NQ40 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC52A3Q9NQ40 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SLC52A3Q9NQ40 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.88■□□□□ 0.61
SLC52A3Q9NQ40 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SLC52A3Q9NQ40 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC52A3Q9NQ40 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SLC52A3Q9NQ40 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SLC52A3Q9NQ40 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 KRT16P6-202ENST00000425692 1426 ntBASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
SLC52A3Q9NQ40 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 AC100791.3-201ENST00000617619 330 ntBASIC18.85■□□□□ 0.61
SLC52A3Q9NQ40 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms