Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.86■□□□□ 0.93
CD248Q9HCU0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD248Q9HCU0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CD248Q9HCU0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.86■□□□□ 0.93
CD248Q9HCU0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CD248Q9HCU0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD248Q9HCU0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CD248Q9HCU0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD248Q9HCU0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD248Q9HCU0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.85■□□□□ 0.93
CD248Q9HCU0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CD248Q9HCU0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD248Q9HCU0 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.85■□□□□ 0.93
CD248Q9HCU0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CD248Q9HCU0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CD248Q9HCU0 PNMA6B-201ENST00000538162 1200 ntBASIC20.85■□□□□ 0.93
CD248Q9HCU0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CD248Q9HCU0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.85■□□□□ 0.93
CD248Q9HCU0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.85■□□□□ 0.93
CD248Q9HCU0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CD248Q9HCU0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD248Q9HCU0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CD248Q9HCU0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.85■□□□□ 0.93
CD248Q9HCU0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.85■□□□□ 0.93
CD248Q9HCU0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.85■□□□□ 0.93
CD248Q9HCU0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CD248Q9HCU0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CD248Q9HCU0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CD248Q9HCU0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CD248Q9HCU0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.84■□□□□ 0.93
CD248Q9HCU0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.84■□□□□ 0.93
CD248Q9HCU0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD248Q9HCU0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
CD248Q9HCU0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CD248Q9HCU0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD248Q9HCU0 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.84■□□□□ 0.93
CD248Q9HCU0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD248Q9HCU0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD248Q9HCU0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD248Q9HCU0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.84■□□□□ 0.93
CD248Q9HCU0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CD248Q9HCU0 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CD248Q9HCU0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CD248Q9HCU0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
CD248Q9HCU0 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.84■□□□□ 0.93
CD248Q9HCU0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
CD248Q9HCU0 AP006294.2-201ENST00000641667 209 ntBASIC20.84■□□□□ 0.93
CD248Q9HCU0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD248Q9HCU0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD248Q9HCU0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.84■□□□□ 0.93
CD248Q9HCU0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CD248Q9HCU0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD248Q9HCU0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD248Q9HCU0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD248Q9HCU0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD248Q9HCU0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD248Q9HCU0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD248Q9HCU0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.83■□□□□ 0.93
CD248Q9HCU0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.83■□□□□ 0.93
CD248Q9HCU0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD248Q9HCU0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.83■□□□□ 0.93
CD248Q9HCU0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD248Q9HCU0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD248Q9HCU0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.83■□□□□ 0.93
CD248Q9HCU0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CD248Q9HCU0 AL596275.1-201ENST00000423464 877 ntBASIC20.83■□□□□ 0.93
CD248Q9HCU0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.83■□□□□ 0.93
CD248Q9HCU0 UNC93B4-201ENST00000505679 747 ntBASIC20.83■□□□□ 0.93
CD248Q9HCU0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.83■□□□□ 0.93
CD248Q9HCU0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.83■□□□□ 0.93
CD248Q9HCU0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CD248Q9HCU0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.83■□□□□ 0.92
CD248Q9HCU0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CD248Q9HCU0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CD248Q9HCU0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CD248Q9HCU0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CD248Q9HCU0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CD248Q9HCU0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CD248Q9HCU0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CD248Q9HCU0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CD248Q9HCU0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD248Q9HCU0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD248Q9HCU0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
CD248Q9HCU0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD248Q9HCU0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD248Q9HCU0 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.82■□□□□ 0.92
CD248Q9HCU0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CD248Q9HCU0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.82■□□□□ 0.92
CD248Q9HCU0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.82■□□□□ 0.92
CD248Q9HCU0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD248Q9HCU0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD248Q9HCU0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.82■□□□□ 0.92
CD248Q9HCU0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.82■□□□□ 0.92
CD248Q9HCU0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CD248Q9HCU0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.82■□□□□ 0.92
CD248Q9HCU0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.82■□□□□ 0.92
CD248Q9HCU0 AL359736.2-201ENST00000621992 437 ntBASIC20.82■□□□□ 0.92
CD248Q9HCU0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.82■□□□□ 0.92
CD248Q9HCU0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD248Q9HCU0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms