Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.98■□□□□ 0.63
VCX3BQ9H321 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
VCX3BQ9H321 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VCX3BQ9H321 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
VCX3BQ9H321 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
VCX3BQ9H321 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
VCX3BQ9H321 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.98■□□□□ 0.63
VCX3BQ9H321 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VCX3BQ9H321 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
VCX3BQ9H321 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
VCX3BQ9H321 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VCX3BQ9H321 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VCX3BQ9H321 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VCX3BQ9H321 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
VCX3BQ9H321 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
VCX3BQ9H321 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.97■□□□□ 0.63
VCX3BQ9H321 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
VCX3BQ9H321 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.97■□□□□ 0.63
VCX3BQ9H321 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.97■□□□□ 0.63
VCX3BQ9H321 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VCX3BQ9H321 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VCX3BQ9H321 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VCX3BQ9H321 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VCX3BQ9H321 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VCX3BQ9H321 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.97■□□□□ 0.63
VCX3BQ9H321 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VCX3BQ9H321 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.97■□□□□ 0.63
VCX3BQ9H321 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VCX3BQ9H321 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VCX3BQ9H321 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.97■□□□□ 0.63
VCX3BQ9H321 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VCX3BQ9H321 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VCX3BQ9H321 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
VCX3BQ9H321 AL691432.2-201ENST00000607222 2038 ntBASIC18.96■□□□□ 0.63
VCX3BQ9H321 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VCX3BQ9H321 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VCX3BQ9H321 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
VCX3BQ9H321 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VCX3BQ9H321 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VCX3BQ9H321 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VCX3BQ9H321 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VCX3BQ9H321 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
VCX3BQ9H321 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
VCX3BQ9H321 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VCX3BQ9H321 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
VCX3BQ9H321 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
VCX3BQ9H321 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.96■□□□□ 0.63
VCX3BQ9H321 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
VCX3BQ9H321 MIR4508-201ENST00000584178 70 ntBASIC18.96■□□□□ 0.63
VCX3BQ9H321 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VCX3BQ9H321 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VCX3BQ9H321 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.96■□□□□ 0.63
VCX3BQ9H321 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VCX3BQ9H321 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.96■□□□□ 0.63
VCX3BQ9H321 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.96■□□□□ 0.63
VCX3BQ9H321 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
VCX3BQ9H321 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.96■□□□□ 0.63
VCX3BQ9H321 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VCX3BQ9H321 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.96■□□□□ 0.63
VCX3BQ9H321 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCX3BQ9H321 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
VCX3BQ9H321 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
VCX3BQ9H321 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCX3BQ9H321 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.95■□□□□ 0.62
VCX3BQ9H321 AL390961.4-201ENST00000623958 2535 ntBASIC18.95■□□□□ 0.62
VCX3BQ9H321 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCX3BQ9H321 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCX3BQ9H321 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCX3BQ9H321 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.95■□□□□ 0.62
VCX3BQ9H321 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.95■□□□□ 0.62
VCX3BQ9H321 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
VCX3BQ9H321 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCX3BQ9H321 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCX3BQ9H321 AP000997.3-201ENST00000623333 2250 ntBASIC18.95■□□□□ 0.62
VCX3BQ9H321 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
VCX3BQ9H321 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
VCX3BQ9H321 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VCX3BQ9H321 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.95■□□□□ 0.62
VCX3BQ9H321 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VCX3BQ9H321 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VCX3BQ9H321 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VCX3BQ9H321 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCX3BQ9H321 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
VCX3BQ9H321 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VCX3BQ9H321 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.94■□□□□ 0.62
VCX3BQ9H321 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.94■□□□□ 0.62
VCX3BQ9H321 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
VCX3BQ9H321 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCX3BQ9H321 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VCX3BQ9H321 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCX3BQ9H321 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.94■□□□□ 0.62
VCX3BQ9H321 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VCX3BQ9H321 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.94■□□□□ 0.62
VCX3BQ9H321 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCX3BQ9H321 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VCX3BQ9H321 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
VCX3BQ9H321 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.94■□□□□ 0.62
VCX3BQ9H321 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
VCX3BQ9H321 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
VCX3BQ9H321 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms