Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.33■□□□□ 0.04
MS4A6AQ9H2W1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MS4A6AQ9H2W1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
MS4A6AQ9H2W1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MS4A6AQ9H2W1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MS4A6AQ9H2W1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MS4A6AQ9H2W1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 RAP2CP1-201ENST00000605103 478 ntBASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC15.32■□□□□ 0.04
MS4A6AQ9H2W1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 AC133552.2-202ENST00000575694 574 ntBASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
MS4A6AQ9H2W1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 AL512625.2-201ENST00000417533 625 ntBASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 AC006970.2-201ENST00000450065 779 ntBASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MS4A6AQ9H2W1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A6AQ9H2W1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MS4A6AQ9H2W1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A6AQ9H2W1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A6AQ9H2W1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.29■□□□□ 0.04
MS4A6AQ9H2W1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.29■□□□□ 0.04
MS4A6AQ9H2W1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
MS4A6AQ9H2W1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A6AQ9H2W1 AC010980.2-201ENST00000587099 1412 ntBASIC15.29■□□□□ 0.04
MS4A6AQ9H2W1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.29■□□□□ 0.04
MS4A6AQ9H2W1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A6AQ9H2W1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A6AQ9H2W1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MS4A6AQ9H2W1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms