Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RNF38Q9H0F5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
RNF38Q9H0F5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
RNF38Q9H0F5 AL135905.2-201ENST00000584934 1404 ntBASIC20.7■□□□□ 0.9
RNF38Q9H0F5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
RNF38Q9H0F5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF38Q9H0F5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RNF38Q9H0F5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RNF38Q9H0F5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF38Q9H0F5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF38Q9H0F5 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF38Q9H0F5 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RNF38Q9H0F5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.7■□□□□ 0.9
RNF38Q9H0F5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF38Q9H0F5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF38Q9H0F5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF38Q9H0F5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF38Q9H0F5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RNF38Q9H0F5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF38Q9H0F5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF38Q9H0F5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF38Q9H0F5 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
RNF38Q9H0F5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF38Q9H0F5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF38Q9H0F5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RNF38Q9H0F5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.68■□□□□ 0.9
RNF38Q9H0F5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RNF38Q9H0F5 AP001412.1-201ENST00000608405 714 ntBASIC20.68■□□□□ 0.9
RNF38Q9H0F5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF38Q9H0F5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF38Q9H0F5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF38Q9H0F5 HTR7P1-201ENST00000538670 1336 ntBASIC20.68■□□□□ 0.9
RNF38Q9H0F5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF38Q9H0F5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF38Q9H0F5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF38Q9H0F5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RNF38Q9H0F5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF38Q9H0F5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF38Q9H0F5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF38Q9H0F5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF38Q9H0F5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF38Q9H0F5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF38Q9H0F5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF38Q9H0F5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF38Q9H0F5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF38Q9H0F5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF38Q9H0F5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF38Q9H0F5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF38Q9H0F5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RNF38Q9H0F5 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF38Q9H0F5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF38Q9H0F5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF38Q9H0F5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.67■□□□□ 0.9
RNF38Q9H0F5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RNF38Q9H0F5 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.67■□□□□ 0.9
RNF38Q9H0F5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RNF38Q9H0F5 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RNF38Q9H0F5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
RNF38Q9H0F5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF38Q9H0F5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF38Q9H0F5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF38Q9H0F5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RNF38Q9H0F5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.66■□□□□ 0.9
RNF38Q9H0F5 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.66■□□□□ 0.9
RNF38Q9H0F5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF38Q9H0F5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.66■□□□□ 0.9
RNF38Q9H0F5 AF186192.3-201ENST00000583427 947 ntBASIC20.66■□□□□ 0.9
RNF38Q9H0F5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF38Q9H0F5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF38Q9H0F5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF38Q9H0F5 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF38Q9H0F5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF38Q9H0F5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF38Q9H0F5 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms